ArticleMicrobes and environments2017
Predominant but Previously-overlooked Prokaryotic Drivers of Reductive Nitrogen Transformation in Paddy Soils, Revealed by Metatranscriptomics.
Article in Microbes and environments, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.
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Who cites it
40 citing papers in PubMed, 91 citations in OpenAlex.
- Environmental considerations and bioremediation applications of the metal-, nitrate-, and organohalide-respiring bacteriumApplied and environmental microbiology · 2026Review
- Iron plaques as terminal electron acceptors optimize clostridial fermentation and nitrogen fixation in rice rhizospheres.The ISME journal · 2026Article
- The invasion ofFrontiers in microbiology · 2026Article
- Nitrogen Fertilizer Reduction in Rice-Eel Co-Culture System Improves the Soil Microbial Diversity and Its Functional Stability.Plants (Basel, Switzerland) · 2025Article
- Ammonium-Generating Microbial Consortia in Paddy Soil Revealed by DNA-Stable Isotope Probing and Metatranscriptomics.Microorganisms · 2025Article
- Unelongated Stems are an Active Nitrogen-Fixing Site in Rice Stems Supported by Both Sugar and Methane Under Low Nitrogen Conditions.Rice (New York, N.Y.) · 2025Article
- Adaptive responses of Trichlorobacter lovleyi to nitrite detoxification reveal overlooked contributions of Geobacterales to nitrate ammonification.The ISME journal · 2025Article
- Synergistic interaction between microbial nitrogen fixation and iron reduction in the environment.The ISME journal · 2025Article
- A Comparison of Rice Root Microbial Dynamics in Organic and Conventional Paddy Fields.Microorganisms · 2024Article
- Unprecedented NmBio · 2024Article
- Global soil metagenomics reveals distribution and predominance of Deltaproteobacteria in nitrogen-fixing microbiome.Microbiome · 2024Article
- Trichlorobacter ammonificans, a dedicated acetate-dependent ammonifier with a novel module for dissimilatory nitrate reduction to ammonia.The ISME journal · 2023Article
- Biological nitrogen fixation in the long-term nitrogen-fertilized and unfertilized paddy fields, with special reference to diazotrophic iron-reducing bacteria.Archives of microbiology · 2023Article
- Potential relevance between soybean nitrogen uptake and rhizosphere prokaryotic communities under waterlogging stress.ISME communications · 2023Article
- Prevalence of Deltaproteobacterial sequences in3 Biotech · 2023Article
- Effect of Rice Straw and Stubble Burning on Soil Physicochemical Properties and Bacterial Communities in Central Thailand.Biology · 2023Article
- The microbiome of the ice-capped Cayambe Volcanic Complex in Ecuador.Frontiers in microbiology · 2023Article
- Enrichment of bacteria involved in the nitrogen cycle and plant growth promotion in soil by sclerotia of rice sheath blight fungus.Stress biology · 2022Article
- Investigation of Rice Yields and Critical N Losses from Paddy Soil under Different N Fertilization Rates with Iron Application.International journal of environmental research and public health · 2022Article
- Advancement of Metatranscriptomics towards Productive Agriculture and Sustainable Environment: A Review.International journal of molecular sciences · 2022Review
Corrections and comments
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Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Waterlogged paddy soils possess anoxic zones in which microbes actively induce reductive nitrogen transformation (RNT). In the present study, a shotgun RNA sequencing analysis (metatranscriptomics) of paddy soil samples revealed that most RNT gene transcripts in paddy soils were derived from Deltaproteobacteria, particularly the genera Anaeromyxobacter and Geobacter. Despite the frequent detection of the rRNA of these microbes in paddy soils, their RNT-associated genes have rarely been identified in previous PCR-based studies. This metatranscriptomic analysis provides novel insights into the diversity of RNT microbes present in paddy soils and the ecological function of Deltaproteobacteria predominating in these soils.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.