Evidence map›Paper›PMID 28442604›Full record

ArticlemBio2017

Hepatitis C Virus Indirectly Disrupts DNA Damage-Induced p53 Responses by Activating Protein Kinase R.

Jonathan K Mitchell, Bentley R Midkiff, Benjamin Israelow, Matthew J Evans, Robert E Lanford, Christopher M Walker, Stanley M Lemon, David R McGivern

Open access · goldAbstract read
In one paragraph

Article in mBio, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 36 citations in OpenAlex.

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  18. Hedgehog Signaling: Implications in Cancers and Viral Infections.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Jonathan K MitchellLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Bentley R MidkiffDepartment of Pathology and Laboratory Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Benjamin IsraelowDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Matthew J EvansDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Robert E LanfordSouthwest National Primate Research Center at Texas Biomedical Research Institute, San Antonio, Texas, USA.
Christopher M WalkerThe Research Institute at Nationwide Children's Hospital, Columbus, Ohio, USA.
Stanley M LemonLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA smlemon@med.unc.edu mcgivern@med.unc.edu.
David R McGivernLineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA smlemon@med.unc.edu mcgivern@med.unc.edu.ORCID 0000-0003-3497-5087
University of North Carolina at Chapel Hill · USIcahn School of Medicine at Mount Sinai · USNationwide Children's Hospital · USTexas Biomedical Research Institute · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI David Darr · 1985 to 2026
$201.5M
The Southwest National Primate Research Center Supplement- Infrastructure improvements of ABSL2 holding areasP51OD011133 · OD · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI Larry S. Schlesinger · 2012 to 2026
$129.7M
Integrated Training in Cancer Model SystemsT32CA009156 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DER, CHANNING J. · 1985 to 2020
$19.7M
TRAINING PROGRAM: MECHANISMS OF VIRUS-HOST INTERACTIONST32AI007647 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI Domenico Tortorella · 2000 to 2026
$11.5M
HCV-specific T cell responseR37AI047367 · NIAID · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI WALKER, CHRISTOPHER M. · 2005 to 2014
$6.1M
T cell Immunity and the Outcome of Acute HCV InfectionR01AI126890 · NIAID · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI GRAKOUI, ARASH, WALKER, CHRISTOPHER M. · 2016 to 2020
$3.7M
Micro-RNA 122 and Chronic Hepatitis CR01AI095690 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LEMON, STANLEY M. · 2011 to 2020
$3.7M
Murine Model of HCV-Associated Human Liver CancerR01CA164029 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LEMON, STANLEY M., SU, LISHAN · 2012 to 2016
$2.3M
Hepatitis C virus polarized cell entry pathwaysR01DK095125 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI EVANS, MATTHEW J · 2012 to 2016
$1.8M
Mechanism of Action of Hepatitis C Virus NS5A InhibitorsR21AI115207 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MCGIVERN, DAVID R · 2015 to 2016
$418k
Hepatitis C Virus interaction with the innate immune system in HepG2-HFL cellsF30DK096892 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI GOLDMAN-ISRAELOW, BENJAMIN · 2012 to 2014
$142k
Disruption of the Host DNA Damage Response by Hepatitis C VirusF32CA192633 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MITCHELL, JONATHAN K. · 2015 to 2016
$63k
NCI NIH HHS F32 CA192633NCI NIH HHS P30 CA016086NCI NIH HHS R01 CA164029NCI NIH HHS T32 CA009156NIAID NIH HHS R01 AI095690NIAID NIH HHS R01 AI126890NIAID NIH HHS R21 AI115207NIAID NIH HHS R37 AI047367NIAID NIH HHS T32 AI007647NIDDK NIH HHS F30 DK096892NIDDK NIH HHS R01 DK095125NIH HHS P51 OD011133
6 · The paper itself

Abstract

Many DNA tumor viruses promote cellular transformation by inactivating the critically important tumor suppressor protein p53. In contrast, it is not known whether p53 function is disrupted by hepatitis C virus (HCV), a unique, oncogenic RNA virus that is the leading infectious cause of liver cancer in many regions of the world. Here we show that HCV-permissive, liver-derived HepG2 cells engineered to constitutively express microRNA-122 (HepG2/miR-122 cells) have normal p53-mediated responses to DNA damage and that HCV replication in these cells potently suppresses p53 responses to etoposide, an inducer of DNA damage, or nutlin-3, an inhibitor of p53 degradation pathways. Upregulation of p53-dependent targets is consequently repressed within HCV-infected cells, with potential consequences for cell survival. Despite this, p53 function is not disrupted by overexpression of the complete HCV polyprotein, suggesting that altered p53 function may result from the host response to viral RNA replication intermediates. Clustered regularly interspaced short palindromic repeat (CRISPR)/Cas9-mediated ablation of double-stranded RNA (dsRNA)-activated protein kinase R (PKR) restored p53 responses while boosting HCV replication, showing that p53 inhibition results directly from viral activation of PKR. The hepatocellular abundance of phosphorylated PKR is elevated in HCV-infected chimpanzees, suggesting that PKR activation and consequent p53 inhibition accompany HCV infection

Indexed as

Host-Pathogen InteractionsAnimalsDisease Models, AnimaleIF-2 KinaseHepacivirusHepatitis CHep G2 CellsHumansPan troglodytesTumor Suppressor Protein p53eIF-2 KinaseTumor Suppressor Protein p53hepatitis C virusliver cancerp53PKRtranslation

Identifiers

PMID28442604
PMCPMC5405228
OpenAlexW2609960515

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.