Evidence map›Paper›PMID 28440896›Full record

ArticleAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2017

Genome-wide meta-analysis identifies a novel susceptibility signal at CACNA2D3 for nicotine dependence.

Xianyong Yin, Chris Bizon, Jeffrey Tilson, Yuan Lin, Ian R Gizer, Cindy L Ehlers, Kirk C Wilhelmsen

Abstract read
In one paragraph

Article in American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 2 pooled it
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 2 syntheses or guidelines pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Nicotine Motivated Behavior inInternational journal of molecular sciences · 2024
    Article
  5. Pathophysiological Roles of Auxiliary Calcium Channel αHandbook of experimental pharmacology · 2023
    Article
  6. Article
  7. Article
  8. Review
  9. Neuronal αPflugers Archiv : European journal of physiology · 2020
    Review
  10. Article
  11. Variants in GABBR1 Gene Are Associated with Methamphetamine Dependence and Two Years' Relapse after Drug Rehabilitation.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2018
    Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Xianyong YinDepartment of Genetics and Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.
Chris BizonDepartment of Genetics and Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.
Jeffrey TilsonDepartment of Genetics and Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.
Yuan LinDepartment of Genetics and Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.
Ian R GizerDepartment of Psychological Sciences, University of Missouri, Columbia, Missouri.
Cindy L EhlersDepartment of Molecular and Cellular Neurosciences, The Scripps Research Institute, La Jolla, California.
Kirk C WilhelmsenDepartment of Genetics and Renaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.ORCID http://orcid.org/0000-0002-4432-8302
University of North Carolina at Chapel Hill · USScripps Research Institute · USUniversity of Missouri · US

Funding

Deep sequencing studies for cannabis and stimulant dependenceR01DA030976 · NIDA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI EHLERS, CINDY L, GELERNTER, JOEL · 2010 to 2014
$16.5M
National Institutes of Health 1-R01-DA030976-01NIDA NIH HHS R01 DA030976
6 · The paper itself

Abstract

Nicotine dependence (ND) has a reported heritability of 40-70%. Low-coverage whole-genome sequencing was conducted in 1,889 samples from the UCSF Family study. Linear mixed models were used to conduct genome-wide association (GWA) tests of ND in this and five cohorts obtained from the database of Genotypes and Phenotypes. Fixed-effect meta-analysis was carried out separately for European (n = 14,713) and African (n = 3,369) participants, and then in a combined analysis of both ancestral groups. The meta-analysis of African participants identified a significant and novel susceptibility signal (rs56247223; p = 4.11 × 10

Indexed as

expression quantitative trait locusgenome-wide meta-analysisnicotine dependencenonsynonymous variantssusceptibility genes

Identifiers

PMID28440896
PMCPMC5656555
OpenAlexW2608356370

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.