Evidence map›Paper›PMID 28440307›Full record

ArticleScientific reports2017

LPS independent activation of the pro-inflammatory receptor Trem1 by C/EBPε in granulocytes.

Hyung C Suh, Touati Benoukraf, Pavithra Shyamsunder, Tong Yin, Qi Cao, Jonathan Said, Stephen Lee, Ricky Lim, Henry Yang, Jacqueline Salotti and 3 more

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Stored RBC transfusions leads to the systemic inflammatory response syndrome in anemic murine neonates.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2024
    Article
  2. Pathogenic GATA2 genetic variants utilize an obligate enhancer mechanism to distort a multilineage differentiation program.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Haematologica · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Hyung C SuhDivision of Hematology-Oncology, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Touati BenoukrafCancer Science Institute of Singapore, National University of Singapore, Singapore.
Pavithra ShyamsunderCancer Science Institute of Singapore, National University of Singapore, Singapore.
Tong YinDivision of Hematology-Oncology, Cedars-Sinai Medical Center, UCLA School of Medicine, Los Angeles, CA, USA.
Qi CaoDivision of Hematology-Oncology, Cedars-Sinai Medical Center, UCLA School of Medicine, Los Angeles, CA, USA.
Jonathan SaidDepartment of Pathology, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Stephen LeeDepartment of Pathology, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Ricky LimCancer Science Institute of Singapore, National University of Singapore, Singapore.
Henry YangCancer Science Institute of Singapore, National University of Singapore, Singapore.
Jacqueline SalottiEukaryotic Transcriptional Regulation Section, Mouse Cancer Genetics Program, NCI-Frederick, Frederick, MD, USA.
Peter F JohnsonEukaryotic Transcriptional Regulation Section, Mouse Cancer Genetics Program, NCI-Frederick, Frederick, MD, USA.
Vikas MadanCancer Science Institute of Singapore, National University of Singapore, Singapore.
H Phillip KoefflerCancer Science Institute of Singapore, National University of Singapore, Singapore.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

C/EBPε is a critical transcriptional factor for granulocyte differentiation and function. Individuals with germline mutations of C/EBPε fail to develop normal granulocytes and suffer from repeated infections. In order to gain a global view of the transcriptional machinery regulated by C/EBPε, we performed whole-genome ChIP-Seq using mouse bone marrow cells. To complement the C/EBPε DNA binding analyses, RNA-Sequencing was done in parallel using sorted mature and immature granulocytes from WT and C/EBPε KO bone marrow. This approach led to the identification of several direct targets of C/EBPε, which are potential effectors of its role in granulocytic differentiation and function. Interestingly, Trem1, a gene critical to granulocyte function, was identified as a direct C/EBPε target gene. Trem1 expression overlaps very closely with expression signature of C/EBPε during hematopoietic development. Luciferase reporter and EMSA assays revealed that C/EBPε binds to the regulatory elements of Trem1 and regulates its expression during granulocytic differentiation. In addition, we provide evidence that inflammatory stimuli (LPS) can also control the expression of Trem1 independent of C/EBPε. Overall, this study provides comprehensive profiling of the transcriptional network controlled by C/EBPε during granulopoiesis and identifies Trem1 as one of its downstream effectors involved in eliciting an immune response.

Indexed as

AnimalsBone Marrow CellsCCAAT-Enhancer-Binding ProteinsCell DifferentiationGranulocytesLipopolysaccharidesMiceNeutrophilsTranscriptomeTriggering Receptor Expressed on Myeloid Cells-1CCAAT-Enhancer-Binding ProteinsLipopolysaccharidesTREM1 protein, mouseTriggering Receptor Expressed on Myeloid Cells-1

Identifiers

PMID28440307
PMCPMC5404328

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.