Evidence map›Paper›PMID 28439475›Full record

ArticleApplications in plant sciences2017

Transcriptomic resources for an endemic Neotropical plant lineage (Gesneriaceae).

Martha L Serrano-Serrano, Anna Marcionetti, Mathieu Perret, Nicolas Salamin

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Applications in plant sciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Martha L Serrano-SerranoDepartment of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland.
Anna MarcionettiDepartment of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland.
Mathieu PerretConservatoire et Jardin botaniques de la Ville de Genève and Laboratory of Plant Systematics and Biodiversity, University of Geneva, Chemin de l'Impératrice 1, 1292 Chambésy, Geneva, Switzerland.
Nicolas SalaminDepartment of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland.
University of Lausanne · CHConservatory and Botanical Garden of the City of Geneva · CHSIB Swiss Institute of Bioinformatics · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

premise of the studyDespite the extensive phenotypic variation that characterizes the Gesneriaceae family, there is a lack of genomic resources to investigate the molecular basis of their diversity. We developed and compared the transcriptomes for two species of the Neotropical lineage of the Gesneriaceae. METHODS AND

resultsIllumina sequencing and de novo assembly of floral and leaf samples were used to generate multigene sequence data for DISCUSSION: This study provides the first step toward a comprehensive multispecies transcriptome characterization of the Gesneriaceae family. These resources are the basis for comparative analyses in this species-rich Neotropical plant group; they will also allow the investigation of the evolutionary importance of multiple metabolic pathways and phenotypic diversity, as well as developmental programs in these nonmodel species.

Indexed as

Brazilian Atlantic Forestde novo transcriptome assemblyfloral/flower evolutiongene expressionGesneriaceaehabitSinningia

Identifiers

PMID28439475
PMCPMC5400431
OpenAlexW2606065262

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.