Evidence map›Paper›PMID 28439033›Full record

ArticleJournal of bacteriology2017

Genome-Wide Analysis of ResD, NsrR, and Fur Binding in Bacillus subtilis during Anaerobic Fermentative Growth by

Onuma Chumsakul, Divya P Anantsri, Tai Quirke, Taku Oshima, Kensuke Nakamura, Shu Ishikawa, Michiko M Nakano

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. GeF-seq: A Simple Procedure for Base-Pair Resolution ChIP-seq.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  4. Review
  5. Article
  6. Implication of a Key Region of SixInternational journal of molecular sciences · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Sequential induction of Fur-regulated genes in response to iron limitation inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Onuma ChumsakulGraduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, Japan.
Divya P AnantsriInstitute of Environmental Health, Oregon Health & Science University, Portland, Oregon, USA.
Tai QuirkeSam Barlow High School, Gresham, Oregon, USA.
Taku OshimaGraduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, Japan.
Kensuke NakamuraDepartment of Life Science and Informatics, Maebashi Institute of Technology, Gunma, Japan.
Shu IshikawaGraduate School of Biological Sciences, Nara Institute of Science and Technology, Nara, Japan shu@people.kobe-u.ac.jp nakanom@ohsu.edu.
Michiko M NakanoInstitute of Environmental Health, Oregon Health & Science University, Portland, Oregon, USA shu@people.kobe-u.ac.jp nakanom@ohsu.edu.
Nara Institute of Science and Technology · JPOregon Health & Science University · USKobe University · JPLegacy Mount Hood Medical Center · USMaebashi Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Upon oxygen limitation, the

Indexed as

Genome, BacterialAnaerobiosisBacillus subtilisBacterial ProteinsDNA, BacterialDNA-Binding ProteinsDNA FootprintingFermentationGene Expression Regulation, BacterialPromoter Regions, GeneticProtein BindingTranscription FactorsBacterial ProteinsDNA, BacterialDNA-Binding ProteinsTranscription FactorsanaerobiosisBacillus subtilisFurgenome-wide bindingNsrRResDtranscription factors

Identifiers

PMID28439033
PMCPMC5472814
OpenAlexW2609217095

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.