Evidence map›Paper›PMID 28439032›Full record

ArticleJournal of bacteriology2017

Inactivation of Transcriptional Regulators during Within-Household Evolution of Escherichia coli.

Dagmara I Kisiela, Matthew Radey, Sandip Paul, Stephen Porter, Kseniya Polukhina, Veronika Tchesnokova, Sofiya Shevchenko, Diana Chan, Maliha Aziz, Timothy J Johnson and 3 more

Open access · bronzeAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of bacteriology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Intrahost evolution of the gut microbiota.Nature reviews. Microbiology · 2023
    Review
  5. Predicting the effect of mutations to investigate recent events of selection across 60,472Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Genome Plasticity ofInfection and immunity · 2018
    Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Dagmara I KisielaDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
Matthew RadeyDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
Sandip PaulDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
Stephen PorterVeterans Affairs Medical Center and University of Minnesota, Minneapolis, Minnesota, USA.
Kseniya PolukhinaDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
Veronika TchesnokovaDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
Sofiya ShevchenkoDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
Diana ChanDepartment of Microbiology, University of Washington, Seattle, Washington, USA.
Maliha AzizDepartment of Environmental and Occupational Health, George Washington University, Washington, DC, USA.
Timothy J JohnsonDepartment of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, Saint Paul, Minnesota, USA.
Lance B PriceDepartment of Environmental and Occupational Health, George Washington University, Washington, DC, USA.
James R JohnsonVeterans Affairs Medical Center and University of Minnesota, Minneapolis, Minnesota, USA.
Evgeni V SokurenkoDepartment of Microbiology, University of Washington, Seattle, Washington, USA evs@uw.edu.
University of Washington · USGeorge Washington University · USUniversity of Minnesota Medical Center · USUniversity of Minnesota · US

Funding

Molecular Clonality of Uropathogenic E. ColiR01AI106007 · NIAID · UNIVERSITY OF WASHINGTON · PI SOKURENKO, EVGENI VENIAMINOVIC · 2014 to 2024
$7.5M
E. coli ST131-H30 colonization: defining community and population level antagonism in the gastrointestinal microbiomeR21AI117654 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI PRICE, LANCE BRADLEY · 2015 to 2016
$418k
Gut reservoir of E. coli ST131I01CX000920 · VA · MINNEAPOLIS VA MEDICAL CENTER · PI JOHNSON, JAMES R · 2014 to 2021
–
CSRD VA I01 CX000920NIAID NIH HHS R01 AI106007NIAID NIH HHS R21 AI117654
6 · The paper itself

Abstract

We analyzed the within-household evolution of two household-associated

Indexed as

Evolution, MolecularCloning, MolecularEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsGene Expression Regulation, BacterialGenome, BacterialHumansPolymorphism, Single NucleotideRegulatory Elements, TranscriptionalEscherichia coli Proteinsadaptive mutationclonal evolutionE. colisepsistranscriptional regulatorurinary tract infection

Identifiers

PMID28439032
PMCPMC5472819
OpenAlexW2607635115

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.