Evidence map›Paper›PMID 28439027›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Biochemical and structural characterization of oxygen-sensitive 2-thiouridine synthesis catalyzed by an iron-sulfur protein TtuA.

Minghao Chen, Shin-Ichi Asai, Shun Narai, Shusuke Nambu, Naoki Omura, Yuriko Sakaguchi, Tsutomu Suzuki, Masao Ikeda-Saito, Kimitsuna Watanabe, Min Yao and 2 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Crystallographic analysis of the Escherichia coli tRNA seleno-modification enzyme in complex with tRNA.Acta crystallographica. Section F, Structural biology communications · 2025
    Article
  3. Article
  4. Article
  5. Structure-based insights into the mechanism of [4Fe-4S]-dependent sulfur insertase LarE.Protein science : a publication of the Protein Society · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Biosynthesis and Degradation of Sulfur Modifications in tRNAs.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Urm1: A Non-Canonical UBL.Biomolecules · 2021
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Minghao ChenGraduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan.
Shin-Ichi AsaiJapan Biological Information Research Center, Japan Biological Informatics Consortium (JBIC), Tokyo 135-0064, Japan.
Shun NaraiGraduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan.
Shusuke NambuInstitute of Multidisciplinary Research for Advanced Materials, Tohoku University, Sendai 980-8577, Japan.
Naoki OmuraGraduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan.
Yuriko SakaguchiDepartment of Chemistry and Biotechnology, Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan.
Tsutomu SuzukiDepartment of Chemistry and Biotechnology, Graduate School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan.
Masao Ikeda-SaitoInstitute of Multidisciplinary Research for Advanced Materials, Tohoku University, Sendai 980-8577, Japan.
Kimitsuna WatanabeBiomedicinal Information Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Tokyo 135-0064, Japan.
Min YaoGraduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan.
Naoki ShigiBiotechnology Research Institute for Drug Discovery, National Institute of Advanced Industrial Science and Technology (AIST), Tokyo 135-0064, Japan; naoki-shigi@aist.go.jp tanaka@sci.hokudai.ac.jp.
Yoshikazu TanakaGraduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan; naoki-shigi@aist.go.jp tanaka@sci.hokudai.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Two-thiouridine (s

Indexed as

Bacterial ProteinsIron-Sulfur ProteinsLigasesThermus thermophilusCatalysisCrystallography, X-RayRNA, BacterialRNA, TransferThiouridine2-thiouridineBacterial ProteinsIron-Sulfur ProteinsLigasesRNA, BacterialRNA, TransferThiouridine2-thiouridinecrystal structureFe-S clustersulfur transfertRNA modification

Identifiers

PMID28439027
PMCPMC5441745

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.