Evidence map›Paper›PMID 28438832›Full record

ArticleMolecular systems biology2017

A photoconversion model for full spectral programming and multiplexing of optogenetic systems.

Evan J Olson, Constantine N Tzouanas, Jeffrey J Tabor

Abstract read
In one paragraph

Article in Molecular systems biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Optogenetic Control of B. subtilis Gene Expression Using the CcaSR System.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  6. Review
  7. Article
  8. Real-time detection of response regulator phosphorylation dynamics in live bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Multiplexing cell-cell communication.Molecular systems biology · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Evan J OlsonGraduate Program in Applied Physics, Rice University, Houston, TX, USA.ORCID 0000-0002-6283-2801
Constantine N TzouanasDepartment of Bioengineering, Rice University, Houston, TX, USA.
Jeffrey J TaborDepartment of Bioengineering, Rice University, Houston, TX, USA jeff.tabor@rice.edu.ORCID 0000-0001-7316-0361

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Optogenetics combines externally applied light signals and genetically engineered photoreceptors to control cellular processes with unmatched precision. Here, we develop a mathematical model of wavelength- and intensity-dependent photoconversion, signaling, and output gene expression for our two previously engineered light-sensing

Indexed as

Escherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialGenetic EngineeringLight Signal TransductionModels, GeneticModels, TheoreticalOptogeneticsPhotoreceptors, MicrobialEscherichia coli ProteinsPhotoreceptors, Microbialoptogeneticspredictive modelingspectral multiplexingsynthetic biologytwo‐component systems

Identifiers

PMID28438832
PMCPMC5408778

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.