Evidence map›Paper›PMID 28438259›Full record

ArticleeLife2017

Variation in olfactory neuron repertoires is genetically controlled and environmentally modulated.

Ximena Ibarra-Soria, Thiago S Nakahara, Jingtao Lilue, Yue Jiang, Casey Trimmer, Mateus Aa Souza, Paulo Hm Netto, Kentaro Ikegami, Nicolle R Murphy, Mairi Kusma and 7 more

Abstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed.

  1. Article
  2. Convergent motifs of early olfactory processing are recapitulated by layer-wise efficient coding.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Ximena Ibarra-SoriaWellcome Trust Sanger Institute, Cambridge, United Kingdom.ORCID 0000-0002-9387-3841
Thiago S NakaharaDepartment of Genetics and Evolution, Institute of Biology, University of Campinas, Campinas, Brazil.
Jingtao LilueWellcome Trust Sanger Institute, Cambridge, United Kingdom.ORCID 0000-0002-1958-0231
Yue JiangDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, United States.
Casey TrimmerMonell Chemical Senses Center, Philadelphia, United States.
Mateus Aa SouzaDepartment of Genetics and Evolution, Institute of Biology, University of Campinas, Campinas, Brazil.
Paulo Hm NettoDepartment of Genetics and Evolution, Institute of Biology, University of Campinas, Campinas, Brazil.
Kentaro IkegamiDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, United States.
Nicolle R MurphyMonell Chemical Senses Center, Philadelphia, United States.
Mairi KusmaWellcome Trust Sanger Institute, Cambridge, United Kingdom.
Andrea KirtonWellcome Trust Sanger Institute, Cambridge, United Kingdom.
Luis R SaraivaWellcome Trust Sanger Institute, Cambridge, United Kingdom.ORCID 0000-0003-4079-0396
Thomas M KeaneWellcome Trust Sanger Institute, Cambridge, United Kingdom.
Hiroaki MatsunamiDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, United States.ORCID 0000-0002-8850-2608
Joel MainlandMonell Chemical Senses Center, Philadelphia, United States.ORCID 0000-0002-5056-4598
Fabio PapesDepartment of Genetics and Evolution, Institute of Biology, University of Campinas, Campinas, Brazil.ORCID 0000-0001-5034-4088
Darren W LoganWellcome Trust Sanger Institute, Cambridge, United Kingdom.ORCID 0000-0003-1545-5510

Funding

Molecular BiologyP30DC011735 · NIDCD · MONELL CHEMICAL SENSES CENTER · PI BACHMANOV, ALEXANDER A · 2011 to 2015
$2.5M
Peripheral Odor Coding in MammalsR01DC014423 · NIDCD · DUKE UNIVERSITY · PI MATSUNAMI, HIROAKI · 2015 to 2019
$2.3M
Perceptual effects of genetic variation in human odorant receptorsR01DC013339 · NIDCD · MONELL CHEMICAL SENSES CENTER · PI MAINLAND, JOEL D · 2013 to 2017
$1.9M
The role of single olfactory receptors in odor perceptionF32DC014202 · NIDCD · MONELL CHEMICAL SENSES CENTER · PI TRIMMER, CASEY · 2014 to 2014
$53k
Medical Research Council MR/L007428/1NIDCD NIH HHS F32 DC014202NIDCD NIH HHS P30 DC011735NIDCD NIH HHS R01 DC013339NIDCD NIH HHS R01 DC014423
6 · The paper itself

Abstract

The mouse olfactory sensory neuron (OSN) repertoire is composed of 10 million cells and each expresses one olfactory receptor (OR) gene from a pool of over 1000. Thus, the nose is sub-stratified into more than a thousand OSN subtypes. Here, we employ and validate an RNA-sequencing-based method to quantify the abundance of all OSN subtypes in parallel, and investigate the genetic and environmental factors that contribute to neuronal diversity. We find that the OSN subtype distribution is stereotyped in genetically identical mice, but varies extensively between different strains. Further, we identify

Indexed as

Genetic VariationAnimalsGene Expression ProfilingMiceOlfactory PathwaysOlfactory Receptor NeuronsReceptors, OdorantSequence Analysis, RNAReceptors, Odorantenvironmental regulationevolutionary biologygenetic regulationgenomicsmouseneuroscienceolfactory receptorRNAseqvariation

Identifiers

PMID28438259
PMCPMC5404925

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.