Evidence map›Paper›PMID 28436149›Full record

ArticlePlant biotechnology journal2018

Transgenic miR156 switchgrass in the field: growth, recalcitrance and rust susceptibility.

Holly L Baxter, Mitra Mazarei, Alexandru Dumitrache, Jace M Natzke, Miguel Rodriguez, Jiqing Gou, Chunxiang Fu, Robert W Sykes, Geoffrey B Turner, Mark F Davis and 4 more

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Shoot Maturation Strengthens FLS2-Mediated Resistance toMolecular plant-microbe interactions : MPMI · 2023
    Article
  3. Article
  4. Article
  5. SilencingFrontiers in plant science · 2020
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Holly L BaxterDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
Mitra MazareiDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
Alexandru DumitracheBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Jace M NatzkeBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Miguel RodriguezBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Jiqing GouBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Chunxiang FuBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Robert W SykesBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Geoffrey B TurnerBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Mark F DavisBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Steven D BrownBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
Brian H DavisonBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.ORCID 0000-0002-7408-3609
Zeng-Yu WangBioEnergy Science Center (BESC), Oak Ridge National Laboratory, Oak Ridge, TN, USA.
C Neal StewartDepartment of Plant Sciences, University of Tennessee, Knoxville, TN, USA.
Oak Ridge National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sustainable utilization of lignocellulosic perennial grass feedstocks will be enabled by high biomass production and optimized cell wall chemistry for efficient conversion into biofuels. MicroRNAs are regulatory elements that modulate the expression of genes involved in various biological functions in plants, including growth and development. In greenhouse studies, overexpressing a microRNA (miR156) gene in switchgrass had dramatic effects on plant architecture and flowering, which appeared to be driven by transgene expression levels. High expressing lines were extremely dwarfed, whereas low and moderate-expressing lines had higher biomass yields, improved sugar release and delayed flowering. Four lines with moderate or low miR156 overexpression from the prior greenhouse study were selected for a field experiment to assess the relationship between miR156 expression and biomass production over three years. We also analysed important bioenergy feedstock traits such as flowering, disease resistance, cell wall chemistry and biofuel production. Phenotypes of the transgenic lines were inconsistent between the greenhouse and the field as well as among different field growing seasons. One low expressing transgenic line consistently produced more biomass (25%-56%) than the control across all three seasons, which translated to the production of 30% more biofuel per plant during the final season. The other three transgenic lines produced less biomass than the control by the final season, and the two lines with moderate expression levels also exhibited altered disease susceptibilities. Results of this study emphasize the importance of performing multiyear field studies for plants with altered regulatory transgenes that target plant growth and development.

Indexed as

BiomassGene Expression Regulation, PlantMicroRNAsPanicumPlant ProteinsPlants, Genetically ModifiedMicroRNAsPlant ProteinsbioconfinementbiomassfloweringmicroRNA156switchgrasstransgene regulation

Identifiers

PMID28436149
PMCPMC5785337
OpenAlexW2609246267

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.