Evidence map›Paper›PMID 28433420›Full record

ArticleAlcohol (Fayetteville, N.Y.)2017

DNA Methylation program in normal and alcohol-induced thinning cortex.

Nail Can Öztürk, Marisol Resendiz, Hakan Öztürk, Feng C Zhou

Open access · greenAbstract read
In one paragraph

Article in Alcohol (Fayetteville, N.Y.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Modeling the enigma of complex disease etiology.Journal of translational medicine · 2023
    Article
  7. Transgenerational Effects of Prenatal Ethanol Exposure in Prepubescent Mice.Frontiers in cell and developmental biology · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. [Mitochondrial DNA hydroxymethylation level in the cerebral cortex of neonatal rats with hypoxic-ischemic brain damage].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2019
    Article
  16. Bisphenol A Exposure and Sperm ACHE Hydroxymethylation in Men.International journal of environmental research and public health · 2019
    Article
  17. Review
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Nail Can ÖztürkAnatomy Department of Mersin University, School of Medicine, Mersin, 33343, Turkey; Department of Anatomy and Cellular Biology, Indiana University School of Medicine, 635 Barnhill Dr., MS5035, Indianapolis, IN, 46202, USA.
Marisol ResendizStark Neuroscience Research Institute, Indiana University School of Medicine, Indianapolis, IN, 46202, USA.
Hakan ÖztürkAnatomy Department of Mersin University, School of Medicine, Mersin, 33343, Turkey.
Feng C ZhouAnatomy Department of Mersin University, School of Medicine, Mersin, 33343, Turkey; Stark Neuroscience Research Institute, Indiana University School of Medicine, Indianapolis, IN, 46202, USA; Department of Anatomy and Cellular Biology, Indiana University School of Medicine, 635 Barnhill Dr., MS5035, Indianapolis, IN, 46202, USA. Electronic address: imce100@iu.edu.
Mersin Üniversitesi · TRIndiana University – Purdue University Indianapolis · USIndiana University School of Medicine

Funding

TRAINING GRANT ON GENETICS ASPECTS OF ALCOHOLISMT32AA007462 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI CRISTINE L CZACHOWSKI · 1985 to 2026
$10.7M
RAT RESEARCH COMPONENTP50AA007611 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI BOSRON, WILLIAM F · 1987 to 2002
$5.3M
Epigenetics of fetal alcohol syndromeR01AA016698 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI ZHOU, FENG C. · 2006 to 2009
$1.1M
Translational Epigenetic Markers for Early Diagnosis of FASDR21AA024216 · NIAAA · INDIANA UNIVERSITY INDIANAPOLIS · PI REITER, JILL L, ZHOU, FENG C. · 2016 to 2017
$413k
NIAAA NIH HHS P50 AA007611NIAAA NIH HHS R01 AA016698NIAAA NIH HHS R21 AA024216NIAAA NIH HHS T32 AA007462
6 · The paper itself

Abstract

While cerebral underdevelopment is a hallmark of fetal alcohol spectrum disorders (FASD), the mechanism(s) guiding the broad cortical neurodevelopmental deficits are not clear. DNA methylation is known to regulate early development and tissue specification through gene regulation. Here, we examined DNA methylation in the onset of alcohol-induced cortical thinning in a mouse model of FASD. C57BL/6 (B6) mice were administered a 4% alcohol (v/v) liquid diet from embryonic (E) days 7-16, and their embryos were harvested at E17, along with isocaloric liquid diet and lab chow controls. Cortical neuroanatomy, neural phenotypes, and epigenetic markers of methylation were assessed using immunohistochemistry, Western blot, and methyl-DNA assays. We report that cortical thickness, neuroepithelial proliferation, and neuronal migration and maturity were found to be deterred by alcohol at E17. Simultaneously, DNA methylation, including 5-methylcytosine (5mC) and 5-hydroxcylmethylcytosine (5hmC), which progresses as an intrinsic program guiding normal embryonic cortical development, was severely affected by in utero alcohol exposure. The intricate relationship between cortical thinning and this DNA methylation program disruption is detailed and illustrated. DNA methylation, dynamic across the multiple cortical layers during the late embryonic stage, is highly disrupted by fetal alcohol exposure; this disruption occurs in tandem with characteristic developmental abnormalities, ranging from structural to molecular. Finally, our findings point to a significant question for future exploration: whether epigenetics guides neurodevelopment or whether developmental conditions dictate epigenetic dynamics in the context of alcohol-induced cortical teratogenesis.

Indexed as

5-MethylcytosineAlcohol DrinkingAnimalsDNA MethylationEpigenesis, GeneticEthanolFemaleFetal Alcohol Spectrum DisordersGenotypeGestational AgeMaternal ExposureMice, Inbred C57BLNeocortexNeurogenesisPhenotypePregnancy5-hydroxymethylcytosine5-MethylcytosineEthanolEpigeneticsFetal Alcohol Spectrum Disorders (FASD)Neurodevelopmental deficitNeuroepigeneticsNeurogenesis

Identifiers

PMID28433420
PMCPMC5664948
OpenAlexW2590966599

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.