Evidence map›Paper›PMID 28432478›Full record

ArticlePlant cell reports2017

The Arabidopsis splicing factors, AtU2AF65, AtU2AF35, and AtSF1 shuttle between nuclei and cytoplasms.

Hyo-Young Park, Keh Chien Lee, Yun Hee Jang, Soon-Kap Kim, May Phyo Thu, Jeong Hwan Lee, Jeong-Kook Kim

Abstract read
PubMed Publisher
In one paragraph

Article in Plant cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  3. Heterologous Expression of TwoInternational journal of molecular sciences · 2023
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  10. Dynamic changes in the transcriptome landscape ofFrontiers in plant science · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Genes · 2020
    Article
  16. Article
  17. Frontiers in plant science · 2019
    Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Hyo-Young ParkDepartment of Life Sciences, Korea University, Anam-dong 5 ga, Seongbuk-gu, Seoul, 02841, Republic of Korea.
Keh Chien LeeDepartment of Life Sciences, Korea University, Anam-dong 5 ga, Seongbuk-gu, Seoul, 02841, Republic of Korea.
Yun Hee JangDepartment of Life Sciences, Korea University, Anam-dong 5 ga, Seongbuk-gu, Seoul, 02841, Republic of Korea.
Soon-Kap KimDivision of Biological and Environmental Sciences and Engineering, Center for Desert Agriculture, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia.
May Phyo ThuDepartment of Life Sciences, Korea University, Anam-dong 5 ga, Seongbuk-gu, Seoul, 02841, Republic of Korea.
Jeong Hwan LeeDepartment of Life Sciences, Chonbuk National University, 567 Baekje-daero, Deokjin-gu, Jeonju-Si, Jeollabuk-do, 54896, Republic of Korea. jhwanlee90@jbnu.ac.kr.
Jeong-Kook KimDepartment of Life Sciences, Korea University, Anam-dong 5 ga, Seongbuk-gu, Seoul, 02841, Republic of Korea. jkkim@korea.ac.kr.
Korea University · KRJeonbuk National University · KRKing Abdullah University of Science and Technology · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageThe Arabidopsis splicing factors, AtU2AF65, AtU2AF35, and AtSF1 shuttle between nuclei and cytoplasms. These proteins also move rapidly and continuously in the nuclei, and their movements are affected by ATP depletion. The U2AF65 proteins are splicing factors that interact with SF1 and U2AF35 proteins to promote U2snRNP for the recognition of the pre-mRNA 3' splice site during early spliceosome assembly. We have determined the subcellular localization and movement of these proteins' Arabidopsis homologs. It was found that Arabidopsis U2AF65 homologs, AtU2AF65a, and AtU2AF65b proteins interact with AtU2AF35a and AtU2AF35b, which are Arabidopsis U2AF35 homologs. We have examined the mobility of these proteins including AtSF1 using fluorescence recovery after photobleaching and fluorescence loss in photobleaching analyses. These proteins displayed dynamic movements in nuclei and their movements were affected by ATP depletion. We have also demonstrated that these proteins shuttle between nuclei and cytoplasms, suggesting that they may also function in cytoplasm. These results indicate that such splicing factors show very similar characteristics to their human counterparts, suggesting evolutionary conservation.

Indexed as

ArabidopsisArabidopsis ProteinsCell NucleusCytoplasmProtein TransportRNA Splicing FactorsArabidopsis ProteinsAt5g51300 protein, ArabidopsisRNA Splicing FactorsDynamic movementFLIPFRAPSF1ShuttlingU2AF35U2AF65

Identifiers

PMID28432478
OpenAlexW2606907706

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.