Evidence map›Paper›PMID 28432321›Full record

ArticleScientific reports2017

Mycobacterium tuberculosis Lineage Distribution in Xinjiang and Gansu Provinces, China.

Haixia Chen, Li He, Hairong Huang, Chengmin Shi, Xumin Ni, Guangming Dai, Liang Ma, Weimin Li

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  4. Sentinel-Site-Based Surveillance ofAntibiotics (Basel, Switzerland) · 2025
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  7. Spatial Distribution of Drug-ResistantPathogens (Basel, Switzerland) · 2023
    Article
  8. Association of Single-Nucleotide Polymorphisms in theInfection and drug resistance · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Effects ofAnnals of translational medicine · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Clustering and recent transmission ofInfection and drug resistance · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Haixia ChenZhejiang Provincial Key Laboratory for Technology and Application of Model Organisms, School of Laboratory Medicine and Life Science, Wenzhou Medical University, Wenzhou, 325035, China.
Li HeAcademy of Mathematics and Systems Science, Chinese Academy of Sciences, Beijing, 100190, China.
Hairong HuangNational Tuberculosis Clinical Lab of China, Beijing Tuberculosis and Thoracic Tumor Research Institute; Beijing Chest Hospital, Capital Medical University, Beijing, 101149, China.
Chengmin ShiBeijing Institute of Genomics, Chinese Academy of Sciences, Beijing, 100101, China.
Xumin NiDepartment of Mathematics, School of Science, Beijing Jiaotong University, Beijing, 100044, China.
Guangming DaiNational Tuberculosis Clinical Lab of China, Beijing Tuberculosis and Thoracic Tumor Research Institute; Beijing Chest Hospital, Capital Medical University, Beijing, 101149, China.
Liang MaBeijing Institute of Genomics, Chinese Academy of Sciences, Beijing, 100101, China. mal@big.ac.cn.
Weimin LiNational Tuberculosis Clinical Lab of China, Beijing Tuberculosis and Thoracic Tumor Research Institute; Beijing Chest Hospital, Capital Medical University, Beijing, 101149, China. lwm_18@aliyun.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycobacterium tuberculosis (M. tuberculosis) genotyping has dramatically improved the understanding of the epidemiology of tuberculosis (TB). In this study, 187 M. tuberculosis isolates from Xinjiang Uygur Autonomous Region (Xinjiang) and Gansu province in China were genotyped using large sequence polymorphisms (LSPs) and variable number tandem repeats (VNTR). Ten isolates, which represent major nodes of VNTR-based minimum spanning tree, were selected and subsequently subjected to multi-locus sequence analyses (MLSA) that include 82 genes. Based on a robust lineage assignment, we tested the association between lineages and clinical characteristics by logistic regression. There are three major lineages of M. tuberculosis prevalent in Xinjiang, viz. the East Asian Lineage 2 (42.1%; 56/133), the Euro-American Lineage 4 (33.1%; 44/133), and the Indian and East African Lineage 3 (24.8%; 33/133); two lineages prevalent in Gansu province, which are the Lineage 2 (87%; 47/54) and the Lineage 4 (13%; 7/54). The topological structures of the MLSA-based phylogeny support the LSP-based identification of M. tuberculosis lineages. The statistical results suggest an association between the Lineage 2 and the hemoptysis/bloody sputum symptom, fever in Uygur patients. The pathogenicity of the Lineage 2 remains to be further investigated.

Indexed as

Genetic VariationGenotypeMultilocus Sequence TypingChinaCluster AnalysisHumansMolecular EpidemiologyMycobacterium tuberculosisTuberculosis

Identifiers

PMID28432321
PMCPMC5430859

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.