Evidence map›Paper›PMID 28431213›Full record

ArticleeLife2017

Genome mining unearths a hybrid nonribosomal peptide synthetase-like-pteridine synthase biosynthetic gene cluster.

Hyun Bong Park, Corey E Perez, Karl W Barber, Jesse Rinehart, Jason M Crawford

Open access · goldAbstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hyun Bong ParkDepartment of Chemistry, Yale University, New Haven, United States.ORCID 0000-0002-2986-3833
Corey E PerezDepartment of Chemistry, Yale University, New Haven, United States.
Karl W BarberDepartment of Cellular and Molecular Physiology, Yale School of Medicine, New Haven, United States.
Jesse RinehartDepartment of Cellular and Molecular Physiology, Yale School of Medicine, New Haven, United States.
Jason M CrawfordDepartment of Chemistry, Yale University, New Haven, United States.ORCID 0000-0002-7583-1242
Yale University · US

Funding

Predoc Training at the Interface Chemistry and BiologyT32GM067543 · NIGMS · YALE UNIVERSITY · PI CRAWFORD, JASON MICHAEL · 2003 to 2022
$7.4M
Revealing substrates and phosphoproteome level function of human STE20 kinasesR01GM117230 · NIGMS · YALE UNIVERSITY · PI ISAACS, FARREN J., RINEHART, JESSE · 2015 to 2024
$3.2M
Cryptic gut bacterial metabolites that regulate colorectal cancer formationDP2CA186575 · NCI · YALE UNIVERSITY · PI CRAWFORD, JASON MICHAEL · 2013 to 2013
$2.5M
Ecological triggers to exploit antibiotic and virulence factor regulationR00GM097096 · NIGMS · YALE UNIVERSITY · PI CRAWFORD, JASON MICHAEL · 2012 to 2014
$721k
NCI NIH HHS DP2 CA186575NIGMS NIH HHS R00 GM097096NIGMS NIH HHS R01 GM117230NIGMS NIH HHS T32 GM067543
6 · The paper itself

Abstract

Nonribosomal peptides represent a large class of metabolites with pharmaceutical relevance. Pteridines, such as pterins, folates, and flavins, are heterocyclic metabolites that often serve as redox-active cofactors. The biosynthetic machineries for construction of these distinct classes of small molecules operate independently in the cell. Here, we discovered an unprecedented nonribosomal peptide synthetase-like-pteridine synthase hybrid biosynthetic gene cluster in

Indexed as

Multigene FamilyBiosynthetic PathwaysComputational BiologyGene DeletionMagnetic Resonance SpectroscopyPeptide SynthasesPhotorhabdusProteomicsPteridinesnon-ribosomal peptide synthasePeptide SynthasesPteridinesbiochemistrybiosynthesisevolutionary biologygenomicsmetabolismnatural productsPhotorhabdus luminescens

Identifiers

PMID28431213
PMCPMC5384830
OpenAlexW2598064261

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.