ArticleDNA research : an international journal for rapid publication of reports on genes and genomes2017
Genetic variants associated with the root system architecture of oilseed rape (Brassica napus L.) under contrasting phosphate supply.
Article in DNA research : an international journal for rapid publication of reports on genes and genomes, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
23 citing papers in PubMed.
- Quantitative Proteomic Analysis of Brassica Napus Reveals Intersections Between Nutrient Deficiency Responses.Plant, cell & environment · 2025Article
- Genome-wide association study identified BnaPAP17 genes involved in exogenous ATP utilization and regulating phosphorous content in Brassica napus.Plant cell reports · 2024Article
- Genome-wide association study ofFrontiers in plant science · 2024Article
- Genome-wide association study reveals candidate genes controlling root system architecture under low phosphorus supply at seedling stage inMolecular breeding : new strategies in plant improvement · 2023Article
- Integrating genome-wide association studies with selective sweep reveals genetic loci associated with tolerance to low phosphate availability inMolecular breeding : new strategies in plant improvement · 2023Article
- Article
- Rapid identification of a major locus qPRL-C06 affecting primary root length in Brassica napus by QTL-seq.Annals of botany · 2023Article
- Integrated analysis of the lncRNA/circRNA-miRNA-mRNA expression profiles reveals novel insights into potential mechanisms in response to root-knot nematodes in peanut.BMC genomics · 2022Article
- Genome-wide association studies reveal putative QTLs for physiological traits under contrasting phosphorous conditions in wheat (Frontiers in genetics · 2022Article
- Construction of a Quantitative Genomic Map, Identification and Expression Analysis of Candidate Genes for Agronomic and Disease-Related Traits inFrontiers in plant science · 2022Article
- Genome-wide association study dissects the genetic control of plant height and branch number in response to low-phosphorus stress in Brassica napus.Annals of botany · 2021Article
- The Bnapus50K array: a quick and versatile genotyping tool for Brassica napus genomic breeding and research.G3 (Bethesda, Md.) · 2021Article
- Integrating a genome-wide association study with transcriptomic data to predict candidate genes and favourable haplotypes influencing Brassica napus seed phytate.DNA research : an international journal for rapid publication of reports on genes and genomes · 2021Article
- Genome-wide association study and transcriptome analysis reveal key genes affecting root growth dynamics in rapeseed.Biotechnology for biofuels · 2021Article
- Dynamic Responses of Barley Root Succinyl-Proteome to Short-Term Phosphate Starvation and Recovery.Frontiers in plant science · 2021Article
- Genetic Dissection of Root Angle ofFrontiers in plant science · 2021Article
- Genome-Wide Association Analysis for Phosphorus Use Efficiency Traits in Mungbean (Frontiers in plant science · 2020Article
- Article
- Root plasticity and Pi recycling within plants contribute to low-P tolerance in Tibetan wild barley.BMC plant biology · 2019Article
- Shovelomics for phenotyping root architectural traits of rapeseed/canola (Brassica napus L.) and genome-wide association mapping.Molecular genetics and genomics : MGG · 2019Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
13 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Breeding crops with ideal root system architecture for efficient absorption of phosphorus is an important strategy to reduce the use of phosphate fertilizers. To investigate genetic variants leading to changes in root system architecture, 405 oilseed rape cultivars were genotyped with a 60K Brassica Infinium SNP array in low and high P environments. A total of 285 single-nucleotide polymorphisms were associated with root system architecture traits at varying phosphorus levels. Nine single-nucleotide polymorphisms corroborate a previous linkage analysis of root system architecture quantitative trait loci in the BnaTNDH population. One peak single-nucleotide polymorphism region on A3 was associated with all root system architecture traits and co-localized with a quantitative trait locus for primary root length at low phosphorus. Two more single-nucleotide polymorphism peaks on A5 for root dry weight at low phosphorus were detected in both growth systems and co-localized with a quantitative trait locus for the same trait. The candidate genes identified on A3 form a haplotype 'BnA3Hap', that will be important for understanding the phosphorus/root system interaction and for the incorporation into Brassica napus breeding programs.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.