Evidence map›Paper›PMID 28428791›Full record

ArticleFrontiers in plant science2017

Genome-Wide Association Study for Pre-harvest Sprouting Resistance in a Large Germplasm Collection of Chinese Wheat Landraces.

Yong Zhou, Hao Tang, Meng-Ping Cheng, Kwame O Dankwa, Zhong-Xu Chen, Zhan-Yi Li, Shang Gao, Ya-Xi Liu, Qian-Tao Jiang, Xiu-Jin Lan and 5 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Identification of a novel major QTL and F-box candidate genes controlling seed dormancy in common wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. A natural allelic variation of TaIAA10-6A confers pre-harvest sprouting resistance in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  8. Article
  9. Article
  10. Breeding Wheat (Plants (Basel, Switzerland) · 2025
    Review
  11. Article
  12. Article
  13. Fine mapping of the major-effect QTLFrontiers in plant science · 2025
    Article
  14. Article
  15. Genome-Wide Association Study of Preharvest Sprouting in Wheat.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  16. Major and stably expressed QTL for traits related to the mature wheat embryo independent of kernel size.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Yong ZhouTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Hao TangTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Meng-Ping ChengTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Kwame O DankwaTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Zhong-Xu ChenTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Zhan-Yi LiTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Shang GaoTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Ya-Xi LiuTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Qian-Tao JiangTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Xiu-Jin LanTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Zhi-En PuTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Yu-Ming WeiTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
You-Liang ZhengTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.
Lee T HickeyQueensland Alliance for Agriculture and Food Innovation, The University of Queensland, BrisbaneQLD, Australia.
Ji-Rui WangTriticeae Research Institute, Sichuan Agricultural UniversityChengdu, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pre-harvest sprouting (PHS) is mainly caused by the breaking of seed dormancy in high rainfall regions, which leads to huge economic losses in wheat. In this study, we evaluated 717 Chinese wheat landraces for PHS resistance and carried out genome-wide association studies (GWAS) using to 9,740 DArT-seq and 178,803 SNP markers. Landraces were grown across six environments in China and germination testing of harvest-ripe grain was used to calculate the germination rate (GR) for each accession at each site. GR was highly correlated across all environments. A large number of landraces (194) displayed high levels of PHS resistance (i.e., mean GR < 0.20), which included nine white-grained accessions. Overall, white-grained accessions displayed a significantly higher mean GR (42.7-79.6%) compared to red-grained accessions (19.1-56.0%) across the six environments. Landraces from mesic growing zones in southern China showed higher levels of PHS resistance than those sourced from xeric areas in northern and north-western China. Three main quantitative trait loci (QTL) were detected by GWAS: one on 5D that appeared to be novel and two co-located with the grain color transcription factor

Indexed as

geographic distributionGWAShaplotypeslandracepre-harvest sproutingwheat

Identifiers

PMID28428791
PMCPMC5382224

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.