Evidence map›Paper›PMID 28428254›Full record

ArticleMolecular biology of the cell2017

A novel physiological role for ARF1 in the formation of bidirectional tubules from the Golgi.

Francesca Bottanelli, Nicole Kilian, Andreas M Ernst, Felix Rivera-Molina, Lena K Schroeder, Emil B Kromann, Mark D Lessard, Roman S Erdmann, Alanna Schepartz, David Baddeley and 3 more

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. ARF GTPases Function at the Golgi.Sub-cellular biochemistry · 2026
    Review
  5. Article
  6. Article
  7. Arfs on the Golgi: four conductors, one orchestra.Frontiers in molecular biosciences · 2025
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Characterization of the smallbioRxiv : the preprint server for biology · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Francesca BottanelliDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Nicole KilianDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Andreas M ErnstDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Felix Rivera-MolinaDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Lena K SchroederDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Emil B KromannDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Mark D LessardDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Roman S ErdmannDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Alanna SchepartzDepartment of Chemistry, Yale University, New Haven, CT 06520.
David BaddeleyDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Joerg BewersdorfDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
Derek ToomreDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520.
James E RothmanDepartment of Cell Biology, Yale University School of Medicine, New Haven, CT 06520 james.rothman@yale.edu.

Funding

Yale Diabetes Research CenterP30DK045735 · NIDDK · YALE UNIVERSITY · PI Richard A Flavell · 1993 to 2026
$44.0M
Yale Liver CenterP30DK034989 · NIDDK · YALE UNIVERSITY · PI YASUKO IWAKIRI · 1986 to 2026
$31.1M
Enabling Nanoscale Dynamic Imaging of Vesicles and OrganellesR01GM118486 · NIGMS · YALE UNIVERSITY · PI BADDELEY, DAVID, BEWERSDORF, JOERG · 2016 to 2019
$3.4M
Surveying protein partnerships and assembly with bipartite tetracysteine displayR01GM083257 · NIGMS · YALE UNIVERSITY · PI SCHEPARTZ, ALANNA · 2008 to 2018
$3.2M
A super-resolution microscope for research and educationS10OD020142 · OD · YALE UNIVERSITY · PI NATHANSON, MICHAEL H · 2015 to 2015
$600k
NIDDK NIH HHS P30 DK034989NIDDK NIH HHS P30 DK045735NIGMS NIH HHS R01 GM083257NIGMS NIH HHS R01 GM118486NIH HHS S10 OD020142Wellcome Trust 203285/Z/16/Z
6 · The paper itself

Abstract

Capitalizing on CRISPR/Cas9 gene-editing techniques and super-resolution nanoscopy, we explore the role of the small GTPase ARF1 in mediating transport steps at the Golgi. Besides its well-established role in generating COPI vesicles, we find that ARF1 is also involved in the formation of long (∼3 µm), thin (∼110 nm diameter) tubular carriers. The anterograde and retrograde tubular carriers are both largely free of the classical Golgi coat proteins coatomer (COPI) and clathrin. Instead, they contain ARF1 along their entire length at a density estimated to be in the range of close packing. Experiments using a mutant form of ARF1 affecting GTP hydrolysis suggest that ARF1[GTP] is functionally required for the tubules to form. Dynamic confocal and stimulated emission depletion imaging shows that ARF1-rich tubular compartments fall into two distinct classes containing 1) anterograde cargoes and clathrin clusters or 2) retrograde cargoes and coatomer clusters.

Indexed as

ADP-Ribosylation Factor 1ClathrinCoat Protein Complex ICOP-Coated VesiclesGolgi ApparatusGTP PhosphohydrolasesGuanosine TriphosphateHeLa CellsHumansHydrolysisIntracellular MembranesADP-Ribosylation Factor 1ClathrinCoat Protein Complex IGTP PhosphohydrolasesGuanosine Triphosphate

Identifiers

PMID28428254
PMCPMC5469610

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.