Evidence map›Paper›PMID 28427233›Full record

ArticleOncotarget2017

Assessment of the interlaboratory variability and robustness of JAK2V617F mutation assays: A study involving a consortium of 19 Italian laboratories.

Margherita Perricone, Francesca Palandri, Emanuela Ottaviani, Mario Angelini, Laura Bagli, Enrica Bellesia, Meris Donati, Donato Gemmati, Patrizia Zucchini, Stefania Mancini and 35 more

Abstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Trial
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

45 authors.

Margherita PerriconeDepartment of Experimental, Diagnostic and Specialty Medicine, Institute of Hematology 'L. and A. Seràgnoli', University of Bologna, S. Orsola-Malpighi Hospital, Bologna, Italy.
Francesca PalandriDepartment of Experimental, Diagnostic and Specialty Medicine, Institute of Hematology 'L. and A. Seràgnoli', University of Bologna, S. Orsola-Malpighi Hospital, Bologna, Italy.
Emanuela OttavianiDepartment of Experimental, Diagnostic and Specialty Medicine, Institute of Hematology 'L. and A. Seràgnoli', University of Bologna, S. Orsola-Malpighi Hospital, Bologna, Italy.
Mario AngeliniMolecular Hematology Laboratory U.O.C of Hematology Hospital Mazzoni, Ascoli Piceno, Italy.
Laura BagliMedical Genetics Unit- Hub Laboratory AUSL Romagna, Pievesestina di Cesena, Italy.
Enrica BellesiaImaging and Laboratory Diagnostic Department, Clinical Chemistry and Endocrinology Laboratory, Hematology Unit, Oncology and Technology Department, Hospital S. Maria Nuova, IRCCS, Reggio Emilia, Italy.
Meris DonatiClinical Pathology Laboratory, A.O. Ospedali Riuniti Marche Nord, Pesaro, Italy.
Donato GemmatiCenter Hemostasis and Thrombosis, Section of Medical Biochemistry, Molecular Biology and Genetics, Department of Biomedical and Specialty Surgical Sciences, University of Ferrara, Ferrara, Italy.
Patrizia ZucchiniDepartment of Medical and Surgical Sciences, Division of Hematology, University of Modena and Reggio Emilia, Modena, Italy.
Stefania ManciniClinical Hematology Laboratory, Department of Molecular and Clinical Sciences, Polytechnic University of Marche, Ancona, Italy.
Valentina MarchicaDepartment of Clinical and Experimental Medicine, University of Parma, Parma, Italy.
Serena TrubiniClinical Pathology, Molecular Biology Laboratory, and Hematology/Bone Marrow Transplantation Unit, AUSL Piacenza, Piacenza, Italy.
Giovanna De MatteisSection of Clinical Biochemistry and Section of Hematology, Azienda Ospedaliera Universitaria Integrata di Verona, Verona, Italy.
Silvia Di ZacomoDepartment of Hematology, Blood Bank and Biotechnology, Ospedale Civile Pescara, Pescara, Italy.
Mosè FavaratoUOS Molecular Diagnostics, Department of Clinical Pathology, ULSS12 Venetian, Venice, Italy.
Annamaria FioroniUOC laboratory medicine, P.O. San Salvatore, Sulmona, L'Aquila, Italy.
Caterina BolzonellaDepartment of Oncology, Laboratory of Pharmacology and Molecular Biology, ULSS 18, Rovigo, Italy.
Giorgia MaccariClinical Hematology, Department of Experimental and Clinical Medical Sciences, University of Udine, Udine, Italy.
Filippo NavagliaDepartment of Laboratory Medicine, University-Hospital of Padova, Padova, Italy.
Daniela GattiDepartment of Haematology and BMT, Healthcare Company of South Tyrol, District of Bolzano, Bolzano, Italy.
Luisa ToffolattiDepartment of Pathology and Haematology, Treviso General Hospital, Treviso, Italy.
Linda OrlandiWerfen, Milano, Italy.
Vèronique LalouxQIAGEN GmbH, Hilden, Germany (Member of The European LeukemiaNet (ELN) Foundation Circle).
Marco ManfriniDepartment of Experimental, Diagnostic and Specialty Medicine, Institute of Hematology 'L. and A. Seràgnoli', University of Bologna, S. Orsola-Malpighi Hospital, Bologna, Italy.
Piero GalieniMolecular Hematology Laboratory U.O.C of Hematology Hospital Mazzoni, Ascoli Piceno, Italy.
Barbara GianniniMedical Genetics Unit- Hub Laboratory AUSL Romagna, Pievesestina di Cesena, Italy.
Alessia TieghiImaging and Laboratory Diagnostic Department, Clinical Chemistry and Endocrinology Laboratory, Hematology Unit, Oncology and Technology Department, Hospital S. Maria Nuova, IRCCS, Reggio Emilia, Italy.
Sara BarulliClinical Pathology Laboratory, A.O. Ospedali Riuniti Marche Nord, Pesaro, Italy.
Maria Luisa SerinoCenter Hemostasis and Thrombosis, Section of Medical Biochemistry, Molecular Biology and Genetics, Department of Biomedical and Specialty Surgical Sciences, University of Ferrara, Ferrara, Italy.
Monica MaccaferriDepartment of Medical and Surgical Sciences, Division of Hematology, University of Modena and Reggio Emilia, Modena, Italy.
Anna Rita ScortechiniClinical Hematology Laboratory, Department of Molecular and Clinical Sciences, Polytechnic University of Marche, Ancona, Italy.
Nicola GiulianiDepartment of Clinical and Experimental Medicine, University of Parma, Parma, Italy.
Daniele VallisaClinical Pathology, Molecular Biology Laboratory, and Hematology/Bone Marrow Transplantation Unit, AUSL Piacenza, Piacenza, Italy.
Massimiliano BonifacioSection of Clinical Biochemistry and Section of Hematology, Azienda Ospedaliera Universitaria Integrata di Verona, Verona, Italy.
Patrizia AccorsiDepartment of Hematology, Blood Bank and Biotechnology, Ospedale Civile Pescara, Pescara, Italy.
Cristina SalbeUOS Molecular Diagnostics, Department of Clinical Pathology, ULSS12 Venetian, Venice, Italy.
Vinicio FazioUOC laboratory medicine, P.O. San Salvatore, Sulmona, L'Aquila, Italy.
Milena GusellaDepartment of Oncology, Laboratory of Pharmacology and Molecular Biology, ULSS 18, Rovigo, Italy.
Eleonora ToffolettiClinical Hematology, Department of Experimental and Clinical Medical Sciences, University of Udine, Udine, Italy.
Marzia SalvucciMedical Genetics Unit- Hub Laboratory AUSL Romagna, Pievesestina di Cesena, Italy.
Mirija SvaldiDepartment of Haematology and BMT, Healthcare Company of South Tyrol, District of Bolzano, Bolzano, Italy.
Filippo GherlinzoniDepartment of Pathology and Haematology, Treviso General Hospital, Treviso, Italy.
Francesca CassaviaWerfen, Milano, Italy.
Francesco OrsiniWerfen, Milano, Italy.
Giovanni MartinelliDepartment of Experimental, Diagnostic and Specialty Medicine, Institute of Hematology 'L. and A. Seràgnoli', University of Bologna, S. Orsola-Malpighi Hospital, Bologna, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To date, a plenty of techniques for the detection of JAK2V617F is used over different laboratories, with substantial differences in specificity and sensitivity. Therefore, to provide reliable and comparable results, the standardization of molecular techniques is mandatory.A network of 19 centers was established to 1) evaluate the inter- and intra-laboratory variability in JAK2V617F quantification, 2) identify the most robust assay for the standardization of the molecular test and 3) allow consistent interpretation of individual patient analysis results. The study was conceived in 3 different rounds, in which all centers had to blindly test DNA samples with different JAK2V617F allele burden (AB) using both quantitative and qualitative assays.The positivity of samples with an AB < 1% was not detected by qualitative assays. Conversely, laboratories performing the quantitative approach were able to determine the expected JAK2V617F AB. Quantitative results were reliable across all mutation loads with moderate variability at low AB (0.1 and 1%; CV = 0.46 and 0.77, respectively). Remarkably, all laboratories clearly distinguished between the 0.1 and 1% mutated samples.In conclusion, a qualitative approach is not sensitive enough to detect the JAK2V617F mutation, especially at low AB. On the contrary, the ipsogen JAK2 MutaQuant CE-IVD kit resulted in a high, efficient and sensitive quantification detection of all mutation loads. This study sets the basis for the standardization of molecular techniques for JAK2V617F determination, which will require the employment of approved operating procedures and the use of certificated standards, such as the recent WHO 1st International Reference Panel for Genomic JAK2V617F.

Indexed as

DNA Mutational AnalysisHumansItalyJanus Kinase 2LaboratoriesMutationMyeloproliferative DisordersObserver VariationJAK2 protein, humanJanus Kinase 2JAK2 V617F mutationmolecular diagnosismyeloproliferative neoplasmsqPCR standardization

Identifiers

PMID28427233
PMCPMC5464813

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