Evidence map›Paper›PMID 28427195›Full record

ArticleOncotarget2017

Screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by RNA-seq.

Yanting Shen, Lu Bu, Rui Li, Zhenzhu Chen, Fei Tian, Na Lu, Qinyu Ge, Yunfei Bai, Zuhong Lu

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 17 citations in OpenAlex.

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  15. Single sample scoring of hepatocellular carcinoma: A study based on data mining.International journal of immunopathology and pharmacology
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Yanting ShenResearch Center for Learning Science, Southeast University, Nanjing, Jiangsu Province 210096, PR China.
Lu BuDepartment of Interventional Radiology, Zhongda Hospital, Medical School of Southeast University, Nanjing, Jiangsu Province, 210009, PR China.
Rui LiResearch Center for Learning Science, Southeast University, Nanjing, Jiangsu Province 210096, PR China.
Zhenzhu ChenResearch Center for Learning Science, Southeast University, Nanjing, Jiangsu Province 210096, PR China.
Fei TianResearch Center for Learning Science, Southeast University, Nanjing, Jiangsu Province 210096, PR China.
Na LuState Key Laboratory of Bioelectronics, Southeast University, Nanjing, Jiangsu Province 210096, PR China.
Qinyu GeState Key Laboratory of Bioelectronics, Southeast University, Nanjing, Jiangsu Province 210096, PR China.
Yunfei BaiState Key Laboratory of Bioelectronics, Southeast University, Nanjing, Jiangsu Province 210096, PR China.
Zuhong LuResearch Center for Learning Science, Southeast University, Nanjing, Jiangsu Province 210096, PR China.
Southeast University · CNZhongda Hospital Southeast University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tumor metastasis is a multistep process involving a number of genetic alterations so that the genetic diagnosis is got increasingly attentions today. The aim of this study was to use RNA-seq to screen the effective differential expression genes in the peripheral blood mononuclear cells for the hepatic carcinoma with metastasis. The results showed that hepatic carcinoma samples gathered according to different metastasis. CCL3, CCL3L1, JUN, IL8, and IL1B were identified in inflammation mediated by chemokine and cytokine signaling pathway (P00031) in the hepatic carcinoma samples with metastasis, and subsequently confirmed by quantitative real-time polymerase chain reaction. In conclusions, CCL3, CCL3L1, JUN, IL8, and IL1B have the potential to be considered as candidates for future molecular diagnosis of the hepatic carcinoma with metastasis. This work may provide us with new visions into the metastasis process and potential efficient clinical diagnosis in the future.

Indexed as

Gene Expression ProfilingGene Expression Regulation, NeoplasticAgedAged, 80 and overCarcinoma, HepatocellularCase-Control StudiesFemaleHumansLeukocytes, MononuclearLiver NeoplasmsMaleMiddle AgedNeoplasm GradingNeoplasm MetastasisNeoplasm StagingReproducibility of Resultsdiagnosishepatic carcinomametastasisPBMCtumor heterogeneity

Identifiers

PMID28427195
PMCPMC5438623
OpenAlexW2593703546

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.