ArticlePlant molecular biology2017
Transcriptomic analysis of molecular responses in Malus domestica 'M26' roots affected by apple replant disease.
Article in Plant molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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Who cites it
25 citing papers in PubMed, 61 citations in OpenAlex.
- Establishing a biomarker set for the diagnosis of apple replant disease using qPCR.Horticulture research · 2026Article
- Selection of stable reference genes for accurate reverse-transcription quantitative PCR in cotton-herbivore studies using virus-induced gene silencing.Scientific reports · 2025Article
- Inoculation of apple plantlets with Rhodococcus pseudokoreensis R79BMC plant biology · 2025Article
- Catch crop amendments and microbial inoculants differently modulate apple rhizosphere microbiomes and plant responses.FEMS microbiology ecology · 2025Article
- Article
- Characteristics of Rhizosphere Microbiome, Soil Chemical Properties, and Plant Biomass and Nutrients inPlants (Basel, Switzerland) · 2024Article
- Biphenyls and dibenzofurans of the rosaceous subtribe Malinae and their role as phytoalexins.Planta · 2023Review
- Deciphering the Mechanism of Tolerance to Apple Replant Disease Using a Genetic Mapping Approach in a Malling 9 ×International journal of molecular sciences · 2023Article
- Responses of transcriptome and metabolome in the roots of Pugionium cornutum (L.) Gaertn to exogenously applied phthalic acid.BMC plant biology · 2022Article
- Transcriptome changes associated with apple (Malus domestica) root defense response after Fusarium proliferatum f. sp. malus domestica infection.BMC genomics · 2022Article
- Nematode-Microbe Complexes in Soils Replanted with Apple.Microorganisms · 2022Article
- Evolutions and Managements of Soil Microbial Community Structure Drove by Continuous Cropping.Frontiers in microbiology · 2022Review
- Identification of Candidate Genes Associated With Tolerance to Apple Replant Disease by Genome-Wide Transcriptome Analysis.Frontiers in microbiology · 2022Article
- Toward a holistic view of orchard ecosystem dynamics: A comprehensive review of the multiple factors governing development or suppression of apple replant disease.Frontiers in microbiology · 2022Review
- Comprehensive Analysis of the Influence of Fulvic Acid from Paper Mill Effluent on Soil Properties, Soil Microbiome, and Growth ofACS omega · 2021Article
- Production of Siderophores by an Apple Root-AssociatedMolecules (Basel, Switzerland) · 2021Article
- Isolation, Identification, and Antibacterial Mechanisms ofFrontiers in microbiology · 2021Article
- Rhizosphere microbial communities associated to rose replant disease: links to plant growth and root metabolites.Horticulture research · 2020Article
- Article
- A systematic analysis of apple root resistance traits toHorticulture research · 2020Review
Corrections and comments
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Authors and funding
3 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageGene expression studies in roots of apple replant disease affected plants suggested defense reactions towards biotic stress to occur which did not lead to adequate responses to the biotic stressors. Apple replant disease (ARD) leads to growth inhibition and fruit yield reduction in replanted populations and results in economic losses for tree nurseries and fruit producers. The etiology is not well understood on a molecular level and causal agents show a great diversity indicating that no definitive cause, which applies to the majority of cases, has been found out yet. Hence, it is pivotal to gain a better understanding of the molecular and physiological reactions of the plant when affected by ARD and later to overcome the disease, for example by developing tolerant rootstocks. For the first time, gene expression was investigated in roots of ARD affected plants employing massive analysis of cDNA ends (MACE) and RT-qPCR. In reaction to ARD, genes in secondary metabolite production as well as plant defense, regulatory and signaling genes were upregulated whereas for several genes involved in primary metabolism lower expression was detected. For internal verification of MACE data, candidate genes were tested via RT-qPCR and a strong positive correlation between both datasets was observed. Comparison of apple 'M26' roots cultivated in ARD soil or γ-irradiated ARD soil suggests that typical defense reactions towards biotic stress take place in ARD affected plants but they did not allow responding to the biotic stressors attack adequately, leading to the observed growth depressions in ARD variants.
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