Evidence map›Paper›PMID 28424905›Full record

ArticleClinical rheumatology2017

Association of STAT4 rs7574865 and PTPN22 rs2476601 polymorphisms with rheumatoid arthritis and non-systemically reacting antibodies in Egyptian patients.

Dalia El-Lebedy, Hala Raslan, Alshaymaa Ibrahim, Ingy Ashmawy, Shereen Abd El-Aziz, Asmaa M Mohammed

Abstract read
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In one paragraph

Article in Clinical rheumatology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 2 pooled it
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 2 syntheses or guidelines pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Iranian journal of pathology · 2025
    Article
  5. Genes · 2024
    Article
  6. STAT4 gene polymorphisms in human diseases.Frontiers in immunology · 2024
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Dalia El-LebedyDepartment of Clinical and Chemical Pathology, Medical Division, National Research Centre, Al-Bohouth Street, Cairo, 12311, Egypt. d_lebedy@yahoo.co.uk.
Hala RaslanDepartment of Internal Medicine, Medical Division, National Research Centre, Cairo, Egypt.
Alshaymaa IbrahimDepartment of Clinical and Chemical Pathology, Medical Division, National Research Centre, Al-Bohouth Street, Cairo, 12311, Egypt.
Ingy AshmawyDepartment of Clinical and Chemical Pathology, Medical Division, National Research Centre, Al-Bohouth Street, Cairo, 12311, Egypt.
Shereen Abd El-AzizDepartment of Clinical and Chemical Pathology, Medical Division, National Research Centre, Al-Bohouth Street, Cairo, 12311, Egypt.
Asmaa M MohammedDepartment of Environmental and Occupational Medicine, National Research Centre, Cairo, Egypt.
National Research Centre · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to investigate association of protein tyrosine phosphatase non-receptor type 22 (PTPN22) rs2476601 and signal transducer and activator of transcription 4 (STAT4) rs7574865 polymorphisms with rheumatoid arthritis (RA) susceptibility and to assess potential association with the status of rheumatoid factor (RF) and anti-cyclic citrullinated peptide (anti-CCP) antibodies, serum neopterin, and disease activity. RF, anti-CCP antibodies, and neopterin were assayed in serum of 100 unrelated RA patients and 114 controls. STAT4 rs7574865 G/T and PTPN22 rs2476601 C/T polymorphisms were genotyped by the TaqMan allelic discrimination method. The frequency of STAT4 variant allele was significantly higher in RA patients than in controls (p = 0.01), while the variant allele of PTPN22 was identified in only two RA patients, in a heterozygous form and in none of control subjects. The frequency of STAT4 variant allele carrier genotypes (GT+TT) was significantly higher among RA patients than in controls (43.7 vs. 10.5%, p = 0.02) and associated with RA under additive and dominant models. The frequency of RF and anti-CCP positivity was significantly higher among RA patients carrying T allele genotypes compared to patients carrying wild genotype (P = 0.02 and 0.04, respectively). No significant associations between STAT4 variant and serum neopterin or disease activity parameters were identified. Our study confirmed the association of STAT4 rs7574865 polymorphism with RA and was the first to indicate an association with RF and anti-CCP antibodies positivity. We also found PTPN22 rs2476601 has no role in susceptibility to RA in Egyptian patients.

Indexed as

AdultAllelesArthritis, RheumatoidAutoantibodiesCase-Control StudiesEgyptFemaleGene FrequencyGenetic Predisposition to DiseaseHumansLogistic ModelsMaleMiddle AgedPolymorphism, Single NucleotideProtein Tyrosine Phosphatase, Non-Receptor Type 22Rheumatoid FactorAutoantibodiesProtein Tyrosine Phosphatase, Non-Receptor Type 22PTPN22 protein, humanRheumatoid FactorSTAT4 protein, humanSTAT4 Transcription FactorAnti-CCPPolymorphismPTPN22RFRheumatoid arthritisSTAT4

Identifiers

PMID28424905
OpenAlexW2605646488

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.