ArticleFrontiers in plant science2017
Identification of TIFY Family Genes and Analysis of Their Expression Profiles in Response to Phytohormone Treatments and
Article in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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Who cites it
29 citing papers in PubMed, 70 citations in OpenAlex.
- Spatiotemporal dynamics of age-related genes and the regulatory network of LaAGL2-3 in Larix kaempferi (Lamb.) Carr. based on the latest genome annotation.BMC plant biology · 2025Article
- Genome-wide identification, characterization, and expression profiling of TIFY family members in Panax notoginseng.BMC genomics · 2025Article
- Comprehensive analysis of annexin gene family and its expression in response to branching architecture and salt stress in crape myrtle.BMC plant biology · 2024Article
- Haplotype-resolved genome assembly of poplar line NL895 provides a valuable tree genomic resource.Forestry research · 2024Article
- Genome-wide identification and expression analysis of PtJAZ gene family in poplar (Populus trichocarpa).BMC genomic data · 2023Article
- Uncovering the Role of PdePrx12 Peroxidase in Enhancing Disease Resistance in Poplar Trees.Journal of fungi (Basel, Switzerland) · 2023Article
- Genome-wide identification of the TIFY family reveals JAZ subfamily function in response to hormone treatment in Betula platyphylla.BMC plant biology · 2023Article
- The responses of poplars to fungal pathogens: A review of the defensive pathway.Frontiers in plant science · 2023Review
- Genome-wide analysis of the TIFY family and function ofFrontiers in plant science · 2023Article
- Genome-wide identification ofPeerJ · 2023Article
- CRISPR/Cas9 disruption of UGT71L1 in poplar connects salicinoid and salicylic acid metabolism and alters growth and morphology.The Plant cell · 2022Article
- GEPSdb: The Gene Expression Database of Poplar under Stress.The plant genome · 2022Article
- Genome-Wide Analysis of the Gene Structure, Expression and Protein Interactions of the Peach (Frontiers in plant science · 2022Article
- Genome-Wide Analysis of the Soybean TIFY Family and Identification ofFrontiers in plant science · 2022Article
- Comparative transcriptomic analysis uncovers conserved pathways involved in adventitious root formation in poplar.Physiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- JA signal-mediated immunity of Dendrobium catenatum to necrotrophic Southern Blight pathogen.BMC plant biology · 2021Article
- Comprehensive molecular dissection of TIFY Transcription factors reveal their dynamic responses to biotic and abiotic stress in wheat (Triticum aestivum L.).Scientific reports · 2021Article
- Genome-wide identification and function characterization of GATA transcription factors during development and in response to abiotic stresses and hormone treatments in pepper.Journal of applied genetics · 2021Article
- Transcriptomic Profiling ofJournal of fungi (Basel, Switzerland) · 2021Article
- Comparative Transcriptome Analysis to Identify Candidate Genes forFrontiers in genetics · 2021Article
Corrections and comments
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The TIFY domain contains approximately 36 conserved amino acids that form the core motif TIF[F/Y]XG, and they were reported to play important roles in plant growth, tissue development and defense regulation. Moreover, more and more evidence has shown that some members of the TIFY gene family perform their functions by modulating plant hormone signaling pathways. Poplar trees are found worldwide, and they comprise approximately 30 species. Benefit from the importance of poplar and its advanced platform, this tree is considered to be the model perennial plant. Here, we conducted a genome-wide identification of TIFY genes in poplar, and 24 TIFY genes were found. These 24 TIFY genes were assigned to different subfamilies according to the presence or absence of domains and motifs that they harbored. Careful analyses of their locations, structures, evolution and duplication patterns revealed an overview of this gene family in poplar. The expression profiles of these 24 TIFY genes were then analyzed in different tissues using publicly available expression data; their expression profiles following different JA/SA treatments and infection with leaf rust pathogen were also carefully examined by qRT-PCR assays. Based on their expression profiles, the functions of a number of TIFY genes could be predicted. By performing this study, we have provided valuable information for further functional characterisation of TIFY genes in poplar and candidate genes for the improvement of poplar disease resistance.
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