Evidence map›Paper›PMID 28423734›Full record

ArticleOncotarget2017

GATA3 and TRPS1 are distinct biomarkers and prognostic factors in breast cancer: database mining for GATA family members in malignancies.

Hao-Yu Lin, De Zeng, Yuan-Ke Liang, Xiao-Long Wei, Chun-Fa Chen

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 45 citations in OpenAlex.

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  14. FMNL1 Exhibits Pro-Metastatic ActivityFrontiers in oncology · 2020
    Article
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  18. Cancer management and research · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Hao-Yu LinDepartment of Breast and Thyroid Surgery, The First Affiliated Hospital of Shantou University Medical College, Shantou, China.
De ZengDepartment of Breast Medical Oncology, Cancer Hospital of Shantou University Medical College, Shantou, China.
Yuan-Ke LiangChangJiang Scholar's Laboratory of Shantou University Medical College, Shantou, China.
Xiao-Long WeiDepartment of Pathology, Cancer Hospital of SUMC, Shantou, China.
Chun-Fa ChenDepartment of Breast and Thyroid Surgery, The First Affiliated Hospital of Shantou University Medical College, Shantou, China.
First Affiliated Hospital of Shantou University Medical College · CNCancer Hospital of Shantou University Medical College · CNShantou University · CNShantou University Medical College · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

GATA transcription factors are zinc finger DNA binding proteins that activate transcription during development and cell differentiation. To date, 7 members of GATA family have been reported. However, the expression patterns and the exact roles of distinct GATA family members contributing to tumorigenesis and progression of breast cancer (BC) remain to be elucidated. Here, we studied the expression of GATA transcripts in a variety of tumor types compared with the normal controls using the ONCOMINE and GOBO databases, along with their corresponding expression profiles in an array of cancer cell lines through CCLE analysis. Based on Kaplan-Meier plotter, we further investigated the prognostic values of GATA members specifically high expressed in BC patients. It was found that, when compared with normal tissues, GATA3 and TRPS1 were distinctly high expressed in BC patients among all GATA members. GATA3 expression was significantly associated with ESR1, while TRPS1 was correlated with ERBB2. In survival analysis, GATA3 and TRPS1 mRNA high expressions were correlated to better survival in BC patients, and TRPS1 high expression was significantly associated with longer RFS in patients who have received chemotherapy. These results suggest that GATA3 and TRPS1 are distinct biomarkers and essential prognostic factors for breast cancer.

Indexed as

Biomarkers, TumorBreast NeoplasmsCell Line, TumorDatabases, GeneticData MiningDNA-Binding ProteinsFemaleGATA3 Transcription FactorGene Expression Regulation, NeoplasticHumansPrognosisRepressor ProteinsSurvival AnalysisTranscription FactorsUp-RegulationBiomarkers, TumorDNA-Binding ProteinsGATA3 protein, humanGATA3 Transcription FactorRepressor ProteinsTranscription FactorsTRPS1 protein, humanbreast cancerchemosensitivitydatabase miningGATAprognostic values

Identifiers

PMID28423734
PMCPMC5471008
OpenAlexW2596771550

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.