Evidence map›Paper›PMID 28422980›Full record

ArticlePloS one2017

Genetic and epigenetic changes in host ABCB1 influences malaria susceptibility to Plasmodium falciparum.

Himanshu Gupta, Sima Chaudhari, Ayushi Rai, Smitha Bhat, Pratima K Sahu, Manjunath H Hande, Sydney C D'Souza, Umakanth Shashikiran, Kapaettu Satyamoorthy

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Diagnosis of cerebral malaria: Tools to reduceFrontiers in cellular and infection microbiology · 2023
    Review
  6. Impact ofFrontiers in genetics · 2023
    Article
  7. Review
  8. Harnessing the Potential of miRNAs in Malaria Diagnostic and Prevention.Frontiers in cellular and infection microbiology · 2021
    Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Himanshu GuptaDepartment of Biotechnology, School of Life Sciences, Manipal University, Manipal, Karnataka, India.
Sima ChaudhariDepartment of Biotechnology, School of Life Sciences, Manipal University, Manipal, Karnataka, India.ORCID http://orcid.org/0000-0001-7830-0407
Ayushi RaiDepartment of Biotechnology, School of Life Sciences, Manipal University, Manipal, Karnataka, India.
Smitha BhatDepartment of Biotechnology, School of Life Sciences, Manipal University, Manipal, Karnataka, India.
Pratima K SahuDepartment of Biochemistry & Molecular Biology, VIMSAR, Burla, Sambalpur, Odisha, India.ORCID http://orcid.org/0000-0002-5572-7253
Manjunath H HandeDepartment of Medicine, Kasturba Medical College, Manipal, Manipal University, Karnataka, India.ORCID http://orcid.org/0000-0001-9040-5252
Sydney C D'SouzaDepartment of Medicine, Kasturba Medical College, Mangalore, Manipal University, Karnataka, India.
Umakanth ShashikiranDepartment of Medicine, Dr TMA Pai Hospital, Udupi, Karnataka, India.ORCID http://orcid.org/0000-0001-5210-7457
Kapaettu SatyamoorthyDepartment of Biotechnology, School of Life Sciences, Manipal University, Manipal, Karnataka, India.
Manipal Academy of Higher Education · INDr. TMA Pai HospitalVeer Surendra Sai Medical College and Hospital · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multiple mechanisms such as genetic and epigenetic variations within a key gene may play a role in malarial susceptibility and response to anti-malarial drugs in the population. ABCB1 is one of the well-studied membrane transporter genes that code for the P-glycoprotein (an efflux protein) and whose effect on malaria disease predisposition and susceptibility to drugs remains to be understood. We studied the association of single nucleotide variations in human ABCB1 that influences its function in subjects with uncomplicated and complicated malaria caused by Plasmodium falciparum (Pf). Global DNA methylation and ABCB1 DNA promoter methylation levels were performed along with transcriptional response and protein expression in subjects with malaria and healthy controls. The rs2032582 locus was significantly associated with complicated and combined malaria groups when compared to controls (p < 0.05). Significant DNA methylation difference was noticed between case and control (p < 0.05). In addition, global DNA methylation levels of the host DNA were inversely proportional to parasitemia in individuals with Pf infection. Our study also revealed the correlation between ABCB1 DNA promoter methylation with rs1128503 and rs2032582 polymorphisms in malaria and was related to increased expression of ABCB1 protein levels in complicated malaria group (p < 0.05) when compared to uncomplicated malaria and control groups. The study provides evidence for multiple mechanisms that may regulate the role of host ABCB1 function to mediate aetiology of malaria susceptibility, prognosis and drug response. These may have clinical implications and therapeutic application for various malarial conditions.

Indexed as

Epigenesis, GeneticGenetic Predisposition to DiseasePromoter Regions, GeneticAdolescentAdultATP Binding Cassette Transporter, Subfamily BCase-Control StudiesDNA MethylationFemaleGenetic LociHost-Parasite InteractionsHumansMalaria, FalciparumMaleMiddle AgedParasitemiaABCB1 protein, humanATP Binding Cassette Transporter, Subfamily B

Identifiers

PMID28422980
PMCPMC5397027
OpenAlexW2605888751

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.