Evidence map›Paper›PMID 28422143›Full record

ArticleScientific reports2017

Dissecting the genetic architecture of Fusarium verticillioides seed rot resistance in maize by combining QTL mapping and genome-wide association analysis.

Ming Ju, Zijian Zhou, Cong Mu, Xuecai Zhang, Jingyang Gao, Yakun Liang, Jiafa Chen, Yabin Wu, Xiaopeng Li, Shiwei Wang and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
14.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Article
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  6. Article
  7. A Critical Review of Recent Advances in Maize Stress Molecular Biology.International journal of molecular sciences · 2024
    Review
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  15. Identification ofFrontiers in plant science · 2022
    Article
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Ming JuCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Zijian ZhouCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Cong MuCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Xuecai ZhangCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Jingyang GaoCollege of Life sciences, Henan Agricultural University, Zhengzhou 450002, China.
Yakun LiangCollege of Life sciences, Henan Agricultural University, Zhengzhou 450002, China.
Jiafa ChenCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Yabin WuCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Xiaopeng LiCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Shiwei WangCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Jingjing WenCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Luming YangCollege of Horticulture, Henan Agricultural University, Zhengzhou 450002, China.
Jianyu WuCollege of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
Henan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fusarium verticillioides can be transmitted via seeds and cause systemic infection in maize (Zea mays L.); its mycotoxin has harmful effects on animal and human health. We combined QTL mapping in recombinant inbred line (RIL) populations with a genome-wide association study (GWAS) of 217 diverse maize lines using 224,152 single nucleotide polymorphisms (SNPs) under controlled conditions to determine the genetic architecture of F. verticillioides seed rot (FSR) resistance. Our study identified 8 quantitative trait loci (QTLs) and 43 genes associated with 57 SNPs that were correlated with FSR resistance through linkage mapping and GWAS, respectively. Among these, there were three candidate genes, namely GRMZM2G0081223, AC213654.3_FG004, and GRMZM2G099255, which were detected in both linkage mapping and GWAS. Furthermore, the near-isogenic lines (NILs) containing GRMZM2G0081223, which also had a susceptible parent background, were found to have a significantly improved level of resistance. In addition, the expression profile of the three candidate genes revealed that they all respond to the infection following inoculation with F. verticillioides. These genetic analyses indicate that FSR resistance is controlled by loci with minor effect, and the polymerization breeding of lines with beneficial alleles and candidate genes could improve FSR resistance in maize.

Indexed as

AnimalsChinaChromosome MappingDisease ResistanceFusariumGenome, PlantGenome-Wide Association StudyHumansPhenotypePlant BreedingPlant DiseasesPolymorphism, Single NucleotideQuantitative Trait LociSeedsZea mays

Identifiers

PMID28422143
PMCPMC5396065
OpenAlexW2607300493

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.