Evidence map›Paper›PMID 28420422›Full record

ArticleMalaria journal2017

High resolution melting: a useful field-deployable method to measure dhfr and dhps drug resistance in both highly and lowly endemic Plasmodium populations.

Yaye Dié Ndiaye, Cyrille K Diédhiou, Amy K Bei, Baba Dieye, Aminata Mbaye, Nasserdine Papa Mze, Rachel F Daniels, Ibrahima M Ndiaye, Awa B Déme, Amy Gaye and 11 more

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Malaria journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. A NovelmedRxiv : the preprint server for health sciences · 2025
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  2. Article
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  5. Genetic surveillance for monitoring the impact of drug use on Plasmodium falciparum populations.International journal for parasitology. Drugs and drug resistance · 2021
    Review
  6. Article
  7. Review
  8. Article
  9. Increased Frequency ofMalaria research and treatment · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 4 countries.

Yaye Dié NdiayeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal. ydndiaye@gmail.com.
Cyrille K DiédhiouLaboratory of Bacteriology and Virology, Hospital Aristide Le Dantec, 7325, Dakar, Senegal.
Amy K BeiLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Baba DieyeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Aminata MbayeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Nasserdine Papa MzeLaboratory of Bacteriology and Virology, Hospital Aristide Le Dantec, 7325, Dakar, Senegal.
Rachel F DanielsDepartment of Immunology and Infectious Diseases, Harvard TH Chan School of Public Health, Boston, MA, 02115, USA.
Ibrahima M NdiayeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Awa B DémeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Amy GayeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Mouhamad SyLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Tolla NdiayeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Aida S BadianeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Mouhamadou NdiayeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Zul PremjiDepartment of Parasitology and Medical Entomology, Muhimbili University College of Health Sciences, Dar-es-Salaam, Tanzania.
Dyann F WirthDepartment of Immunology and Infectious Diseases, Harvard TH Chan School of Public Health, Boston, MA, 02115, USA.
Souleymane MboupLaboratory of Bacteriology and Virology, Hospital Aristide Le Dantec, 7325, Dakar, Senegal.
Donald KrogstadTulane University, New Orleans, LA, USA.
Sarah K VolkmanThe International Centers of Excellence for Malaria Research (ICEMR) Program, Dakar, Senegal.
Ambroise D AhouidiLaboratory of Bacteriology and Virology, Hospital Aristide Le Dantec, 7325, Dakar, Senegal.
Daouda NdiayeLaboratory of Parasitology Mycology, Aristide le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, 5005, Dakar, Senegal.
Cheikh Anta Diop University · SNHôpital Aristide Le Dantec · SNAga Khan University Nairobi · KEBroad Institute · USHarvard University · USSimmons University · USTulane University · US

Funding

Sequencing and Genomics CoresU19AI089696 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI KOITA, OUSMANE ALIOU · 2010 to 2016
$10.6M
Novel Genetic Mechanism of Artemisinin Resistance for MalariaR01AI099105 · NIAID · HARVARD SCHOOL OF PUBLIC HEALTH · PI HARTL, DANIEL L, WIRTH, DYANN F · 2013 to 2021
$5.4M
NIAID NIH HHS U19 AI089696
6 · The paper itself

Abstract

backgroundEmergence and spread of drug resistance to every anti-malarial used to date, creates an urgent need for development of sensitive, specific and field-deployable molecular tools for detection and surveillance of validated drug resistance markers. Such tools would allow early detection of mutations in resistance loci. The aim of this study was to compare common population signatures and drug resistance marker frequencies between two populations with different levels of malaria endemicity and history of anti-malarial drug use: Tanzania and Sénégal. This was accomplished by implementing a high resolution melting assay to study molecular markers of drug resistance as compared to polymerase chain reaction-restriction fragment length polymorphism (PCR/RFLP) methodology.

methodsFifty blood samples were collected each from a lowly malaria endemic site (Sénégal), and a highly malaria endemic site (Tanzania) from patients presenting with uncomplicated Plasmodium falciparum malaria at clinic. Data representing the DHFR were derived using both PCR-RFLP and HRM assay; while genotyping data representing the DHPS were evaluated in Senegal and Tanzania using HRM. Msp genotyping analysis was used to characterize the multiplicity of infection in both countries.

resultsA high prevalence of samples harbouring mutant DHFR alleles was observed in both population using both genotyping techniques. HRM was better able to detect mixed alleles compared to PCR/RFLP for DHFR codon 51 in Tanzania; and only HRM was able to detect mixed infections from Senegal. A high prevalence of mutant alleles in DHFR (codons 51, 59, 108) and DHPS (codon 437) were found among samples from Sénégal while no mutations were observed at DHPS codons 540 and 581, from both countries. Overall, the frequency of samples harbouring either a single DHFR mutation (S108N) or double mutation in DHFR (C59R/S108N) was greater in Sénégal compared to Tanzania.

conclusionHere the results demonstrate that HRM is a rapid, sensitive, and field-deployable alternative technique to PCR-RFLP genotyping that is useful in populations harbouring more than one parasite genome (polygenomic infections). In this study, a high levels of resistance polymorphisms was observed in both dhfr and dhps, among samples from Tanzania and Sénégal. A routine monitoring by molecular markers can be a way to detect emergence of resistance involving a change in the treatment policy.

Indexed as

Drug ResistancePoint-of-Care SystemsTransition TemperatureAdolescentChildChild, PreschoolDihydropteroate SynthaseGenotypeGenotyping TechniquesHumansMalaria, FalciparumMolecular Diagnostic TechniquesPlasmodiumPolymerase Chain ReactionPolymorphism, Restriction Fragment LengthSenegalDihydropteroate SynthaseTetrahydrofolate DehydrogenasedhfrdhpsHRMPCR/RFLPPlasmodium falciparumSenegalTanzania

Identifiers

PMID28420422
PMCPMC5395743
OpenAlexW2606782120

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.