Evidence map›Paper›PMID 28418314›Full record

ArticleEmerging infectious diseases2017

Population Genomics of Legionella longbeachae and Hidden Complexities of Infection Source Attribution.

Rodrigo Bacigalupe, Diane Lindsay, Giles Edwards, J Ross Fitzgerald

Open access · diamondAbstract read
In one paragraph

Article in Emerging infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

  1. Genomic divergence and phenotypic heterogeneity ofApplied and environmental microbiology · 2026
    Article
  2. Global climate gradients structure soilbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Severe Legionnaires' disease.Annals of intensive care · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. An outbreak investigation ofEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2021
    Article
  13. Legionellosis Caused by Non-Microorganisms · 2021
    Review
  14. Article
  15. Article
  16. Review
  17. Complete Genome Sequence ofGenome announcements · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Rodrigo Bacigalupe
Diane Lindsay
Giles Edwards
J Ross Fitzgerald
University of Edinburgh · GBRoslin Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J004227/1Chief Scientist Office ETM/421
6 · The paper itself

Abstract

Legionella longbeachae is the primary cause of legionellosis in Australasia and Southeast Asia and an emerging pathogen in Europe and the United States; however, our understanding of the population diversity of L. longbeachae from patient and environmental sources is limited. We analyzed the genomes of 64 L. longbeachae isolates, of which 29 were from a cluster of legionellosis cases linked to commercial growing media in Scotland in 2013 and 35 were non-outbreak-associated isolates from Scotland and other countries. We identified extensive genetic diversity across the L. longbeachae species, associated with intraspecies and interspecies gene flow, and a wide geographic distribution of closely related genotypes. Of note, we observed a highly diverse pool of L. longbeachae genotypes within compost samples that precluded the genetic establishment of an infection source. These data represent a view of the genomic diversity of L. longbeachae that will inform strategies for investigating future outbreaks.

Indexed as

Genome, BacterialGenomicsAustraliaCluster AnalysisComputational BiologyGene FlowGenetic VariationHigh-Throughput Nucleotide SequencingHumansLegionella longbeachaeLegionellosisNew ZealandPhylogenyPlasmidsRecombination, GeneticRNA, BacterialRNA, BacterialRNA, Ribosomal, 16Sbacteriaenvironmental genotypesepidemiologygenomic diversitylegionellaLegionella longbeachaelegionellosisoutbreakspathogenic genotypesphylogenyplasmidsrecombinationsource attribution

Identifiers

PMID28418314
PMCPMC5403047
OpenAlexW2599482080

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.