Evidence map›Paper›PMID 28415684›Full record

ArticleOncotarget2017

The long noncoding RNA linc-NeD125 controls the expression of medulloblastoma driver genes by microRNA sponge activity.

Pietro Laneve, Agnese Po, Annarita Favia, Ivano Legnini, Vincenzo Alfano, Jessica Rea, Valerio Di Carlo, Valeria Bevilacqua, Evelina Miele, Angela Mastronuzzi and 5 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 50 citations in OpenAlex.

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  19. The Non-coding Side of Medulloblastoma.Frontiers in cell and developmental biology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 2 countries.

Pietro LaneveCenter for Life NanoScience@Sapienza, Istituto Italiano di Tecnologia, 00161 Rome, Italy.
Agnese PoDepartment of Molecular Medicine, Sapienza University of Rome, 00161 Rome, Italy.
Annarita FaviaInstitute of Molecular Biology and Pathology, National Research Council, 00185 Rome, Italy.
Ivano LegniniDepartment of Biology and Biotechnology, Sapienza University of Rome, 00185 Rome, Italy.
Vincenzo AlfanoCenter for Life NanoScience@Sapienza, Istituto Italiano di Tecnologia, 00161 Rome, Italy.
Jessica ReaDepartment of Biology and Biotechnology, Sapienza University of Rome, 00185 Rome, Italy.
Valerio Di CarloDepartment of Biology and Biotechnology, Sapienza University of Rome, 00185 Rome, Italy.
Valeria BevilacquaDepartment of Biology and Biotechnology, Sapienza University of Rome, 00185 Rome, Italy.
Evelina MieleCenter for Life NanoScience@Sapienza, Istituto Italiano di Tecnologia, 00161 Rome, Italy.
Angela MastronuzziDepartment of Hematology/Oncology and Stem Cell Transplantation, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.
Andrea CaraiDepartment of Neuroscience and Neurorehabilitation, Neurosurgery Unit, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.
Franco LocatelliDepartment of Hematology/Oncology and Stem Cell Transplantation, Bambino Gesù Children's Hospital, IRCCS, 00165 Rome, Italy.
Irene BozzoniCenter for Life NanoScience@Sapienza, Istituto Italiano di Tecnologia, 00161 Rome, Italy.
Elisabetta FerrettiDepartment of Experimental Medicine Sapienza University of Rome, 00161 Rome, Italy.
Elisa CaffarelliCenter for Life NanoScience@Sapienza, Istituto Italiano di Tecnologia, 00161 Rome, Italy.
Bambino Gesù Children's Hospital · ITSapienza University of Rome · ITInstitute of Molecular Biology and Pathology · ITItalian Institute of Technology · ITCentre for Genomic Regulation · ESIstituto Nazionale Genetica Molecolare · ITIstituto Pasteur · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long noncoding RNAs (lncRNAs) are major regulators of physiological and disease-related gene expression, particularly in the central nervous system. Dysregulated lncRNA expression has been documented in several human cancers, and their tissue-specificity makes them attractive candidates as diagnostic/prognostic biomarkers and/or therapeutic agents. Here we show that linc-NeD125, which we previously characterized as a neuronal-induced lncRNA, is significantly overexpressed in Group 4 medulloblastomas (G4 MBs), the largest and least well characterized molecular MB subgroup. Mechanistically, linc-NeD125 is able to recruit the miRNA-induced silencing complex (miRISC) and to directly bind the microRNAs miR-19a-3p, miR-19b-3p and miR-106a-5p. Functionally, linc-NeD125 acts as a competing endogenous RNA (ceRNA) that, sequestering the three miRNAs, leads to de-repression of their targets CDK6, MYCN, SNCAIP, and KDM6A, which are major driver genes of G4 MB. Accordingly, linc-NeD125 downregulation reduces G4 cell proliferation. Moreover, we also provide evidence that linc-NeD125 ectopic expression in the aggressive Group 3 MB cells attenuates their proliferation, migration and invasion.This study unveils the first lncRNA-based ceRNA network in central nervous system tumours and provides a novel molecular circuit underlying the enigmatic Group 4 medulloblastoma.

Indexed as

Gene Expression Regulation, NeoplasticRNA InterferenceCell Line, TumorCell MovementCell ProliferationCerebellar NeoplasmsGene ExpressionGene Knockdown TechniquesHumansMedulloblastomaMicroRNAsRNA, Long NoncodingMicroRNAsNeD125 long non-coding RNA, humanRNA, Long Noncodingcancer driver genescompeting endogenous RNAsGroup 4 medulloblastomalong noncoding RNAsmicroRNAs

Identifiers

PMID28415684
PMCPMC5458184
OpenAlexW2594188745

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.