Evidence map›Paper›PMID 28414767›Full record

ArticlePloS one2017

The fungal natural product azaphilone-9 binds to HuR and inhibits HuR-RNA interaction in vitro.

Kawaljit Kaur, Xiaoqing Wu, James K Fields, David K Johnson, Lan Lan, Miranda Pratt, Amber D Somoza, Clay C C Wang, John Karanicolas, Berl R Oakley and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. Regulation of RNA-binding proteins by small biomolecules.Nature reviews. Molecular cell biology · 2026
    Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. RNA binding proteins in cancer chemotherapeutic drug resistance.Frontiers in cell and developmental biology · 2024
    Review
  9. Article
  10. Review
  11. Review
  12. Low Molecular Weight Inhibitors Targeting the RNA-Binding Protein HuR.International journal of molecular sciences · 2023
    Article
  13. Article
  14. Review
  15. Deciphering the evolution of flavin-dependent monooxygenase stereoselectivity using ancestral sequence reconstruction.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  16. Review
  17. Conversion of Polyethylenes into Fungal Secondary Metabolites.Angewandte Chemie (International ed. in English) · 2023
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Kawaljit KaurDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.
Xiaoqing WuDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.
James K FieldsDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.
David K JohnsonMolecular Graphics and Modeling Laboratory and the Computational Chemical Biology Core, University of Kansas, Lawrence, Kansas, United States of America.
Lan LanDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.
Miranda PrattDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.
Amber D SomozaDepartment of Chemistry, University of Southern California, Los Angeles, California, United States of America.
Clay C C WangDepartment of Chemistry, University of Southern California, Los Angeles, California, United States of America.
John KaranicolasDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.
Berl R OakleyDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.
Liang XuDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.
Roberto N De GuzmanDepartment of Molecular Biosciences, University of Kansas, Lawrence, Kansas, United States of America.ORCID http://orcid.org/0000-0003-1172-2917
University of Kansas · USUniversity of Southern California · US

Funding

U of Kansas/Haskell Indian Nations U.IRACDA ProjectK12GM063651 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI DE GUZMAN, ROBERTO N · 2002 to 2022
$10.0M
Protein Structure Laboratory P30GM110761 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI HANZLIK, ROBERT P · 2014 to 2018
$5.6M
Molecular Genetic Mining of the Aspergillus Nidulans Secondary MetabolomeP01GM084077 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI OAKLEY, BERL RAY · 2008 to 2012
$5.4M
NMR studies of bacterial needle and tip proteinsR01AI074856 · NIAID · UNIVERSITY OF KANSAS LAWRENCE · PI DE GUZMAN, ROBERTO N · 2008 to 2018
$3.6M
Molecular cancer therapy targeting HuR-ARE interactionR01CA191785 · NCI · UNIVERSITY OF KANSAS LAWRENCE · PI AUBE, JEFFREY, XU, LIANG · 2015 to 2019
$2.1M
Small molecules modulating RNA-binding protein Msi1R01CA178831 · NCI · UNIVERSITY OF KANSAS LAWRENCE · PI NEUFELD, KRISTI L, XU, LIANG · 2014 to 2016
$1.3M
NCI NIH HHS R01 CA178831NCI NIH HHS R01 CA191785NIAID NIH HHS R01 AI074856NIGMS NIH HHS K12 GM063651NIGMS NIH HHS P01 GM084077NIGMS NIH HHS P30 GM110761
6 · The paper itself

Abstract

The RNA-binding protein Hu antigen R (HuR) binds to AU-rich elements (ARE) in the 3'-untranslated region (UTR) of target mRNAs. The HuR-ARE interactions stabilize many oncogenic mRNAs that play important roles in tumorigenesis. Thus, small molecules that interfere with the HuR-ARE interaction could potentially inhibit cancer cell growth and progression. Using a fluorescence polarization (FP) competition assay, we identified the compound azaphilone-9 (AZA-9) derived from the fungal natural product asperbenzaldehyde, binds to HuR and inhibits HuR-ARE interaction (IC50 ~1.2 μM). Results from surface plasmon resonance (SPR) verified the direct binding of AZA-9 to HuR. NMR methods mapped the RNA-binding interface of HuR and identified the involvement of critical RNA-binding residues in binding of AZA-9. Computational docking was then used to propose a likely binding site for AZA-9 in the RNA-binding cleft of HuR. Our results show that AZA-9 blocks key RNA-binding residues of HuR and disrupts HuR-RNA interactions in vitro. This knowledge is needed in developing more potent AZA-9 derivatives that could lead to new cancer therapy.

Indexed as

3' Untranslated RegionsAntigens, SurfaceAU Rich ElementsBenzopyransBinding SitesBiological ProductsELAV-Like Protein 1Fluorescence PolarizationFungiHumansPigments, BiologicalProtein BindingRNARNA-Binding ProteinsRNA, MessengerSmall Molecule Libraries3' Untranslated RegionsAntigens, SurfaceazaphiloneBenzopyransBiological ProductsELAV-Like Protein 1Pigments, BiologicalRNARNA-Binding ProteinsRNA, MessengerSmall Molecule Libraries

Identifiers

PMID28414767
PMCPMC5393604
OpenAlexW2605818487

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.