Evidence map›Paper›PMID 28413702›Full record

ArticleBrain and behavior2017

Targeted sequencing identifies genetic polymorphisms of flavin-containing monooxygenase genes contributing to susceptibility of nicotine dependence in European American and African American.

Tian-Xiao Zhang, Nancy L Saccone, Laura J Bierut, John P Rice

Open access · goldAbstract read
In one paragraph

Article in Brain and behavior, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Pathway analysis of smoking-induced changes in buccal mucosal gene expression.The Egyptian journal of medical human genetics · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Tian-Xiao ZhangDepartment of Psychiatry Washington University School of Medicine St. Louis MO USA.ORCID 0000-0002-5835-8625
Nancy L SacconeDepartment of Genetics Washington University School of Medicine St. Louis MO USA.
Laura J BierutDepartment of Psychiatry Washington University School of Medicine St. Louis MO USA.
John P RiceDepartment of Psychiatry Washington University School of Medicine St. Louis MO USA.
Washington University in St. Louis · US

Funding

The Collaborative Genetic Study of Nicotine DependenceP01CA089392 · NCI · WASHINGTON UNIVERSITY · PI BIERUT, LAURA J. · 2001 to 2012
$17.3M
Transdisciplinary Studies of Genetic Variation in Colorectal CancerU19CA148107 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GRUBER, STEPHEN B · 2010 to 2014
$11.1M
Genetics Study of Nicotine Dependence in African AmericansR01DA025888 · NIDA · WASHINGTON UNIVERSITY · PI BIERUT, LAURA J., JOHNSON, ERIC OTTO · 2009 to 2014
$4.7M
HUMAN GENETIC VARIATION IN SMOKING AND ADDICTION RISKR01DA026911 · NIDA · WASHINGTON UNIVERSITY · PI SACCONE, NANCY L · 2009 to 2013
$2.1M
NCI NIH HHS P01 CA089392NCI NIH HHS U19 CA148107NHLBI NIH HHS HHSN268201100011CNHLBI NIH HHS HHSN268201100011INIDA NIH HHS R01 DA025888NIDA NIH HHS R01 DA026911
6 · The paper itself

Abstract

backgroundSmoking is a leading cause of preventable death. Early studies based on samples of twins have linked the lifetime smoking practices to genetic predisposition. The flavin-containing monooxygenase (FMO) protein family consists of a group of enzymes that metabolize drugs and xenobiotics. Both

methodsIn this study, we investigated the potential of FMO genes to confer risk of nicotine dependence via deep targeted sequencing in 2,820 study subjects comprising 1,583 nicotine dependents and 1,237 controls from European American and African American. Specifically, we focused on the two genomic segments including

resultsWe identified different clusters of significant common variants in European (with most significant SNP rs6674596,

conclusionsOur findings indicated significant association between FMO genes and nicotine dependence. Replications of our findings in other ethnic groups were needed in the future. Most of the significant variants identified were SNPs located within intronic regions or with unknown functional significance, indicating a need for future work to understand the underlying functional significance of these signals.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAdultAlgorithmsBlack or African AmericanFemaleGenetic Association StudiesGenotyping TechniquesHaplotypesHumansMaleMiddle AgedOxygenasesTobacco Use DisorderUnited StatesWhite Peopledimethylaniline monooxygenase (N-oxide forming)Oxygenasesflavin‐containing monooxygenasegenetic associationrare variantstargeted sequencing

Identifiers

PMID28413702
PMCPMC5390834
OpenAlexW2595112200

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.