Evidence map›Paper›PMID 28411225›Full record

ArticleApplied and environmental microbiology2017

A Genome-Wide Search for Ionizing-Radiation-Responsive Elements in Deinococcus radiodurans Reveals a Regulatory Role for the DNA Gyrase Subunit A Gene's 5' Untranslated Region in the Radiation and Desiccation Response.

Jordan K Villa, Paul Amador, Justin Janovsky, Arijit Bhuyan, Roland Saldanha, Thomas J Lamkin, Lydia M Contreras

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Quantitative morphological analysis ofApplied and environmental microbiology · 2024
    Article
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  5. Structural features and functional implications of proteins enabling the robustness ofComputational and structural biotechnology journal · 2020
    Review
  6. Discovery and Characterization of NativeApplied and environmental microbiology · 2019
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jordan K VillaInstitute of Cellular and Molecular Biology, University of Texas at Austin, Austin, Texas, USA.
Paul AmadorInstitute of Cellular and Molecular Biology, University of Texas at Austin, Austin, Texas, USA.
Justin JanovskyInstitute of Cellular and Molecular Biology, University of Texas at Austin, Austin, Texas, USA.
Arijit BhuyanMcKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas,USA.
Roland SaldanhaUES, Inc., Dayton, Ohio, USA.
Thomas J LamkinAir Force Research Laboratory/XPRA Wright-Patterson AFB, Ohio, USA.
Lydia M ContrerasMcKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas,USA lcontrer@che.utexas.edu.
The University of Texas at Austin · USUES (United States) · USUnited States Air Force Research Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tight regulation of gene expression is important for the survival of

Indexed as

Gene Expression Regulation, BacterialGenome, BacterialResponse Elements5' Untranslated RegionsBacterial ProteinsBase SequenceDeinococcusDesiccationDNA GyraseHydrogen PeroxideRadiation, Ionizing5' Untranslated RegionsBacterial ProteinsDNA GyraseHydrogen Peroxide5′ UTRDeinococcus radioduransgene regulationionizing radiationRNA

Identifiers

PMID28411225
PMCPMC5452802
OpenAlexW2605927324

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.