Evidence map›Paper›PMID 28410996›Full record

ArticleMolecular cell2017

Delayed Accumulation of H3K27me3 on Nascent DNA Is Essential for Recruitment of Transcription Factors at Early Stages of Stem Cell Differentiation.

Svetlana Petruk, Jingli Cai, Robyn Sussman, Guizhi Sun, Sina K Kovermann, Samanta A Mariani, Bruno Calabretta, Steven B McMahon, Hugh W Brock, Lorraine Iacovitti and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
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  12. Fibrosis-the tale of H3K27 histone methyltransferases and demethylases.Frontiers in cell and developmental biology · 2023
    Review
  13. Article
  14. Article
  15. Review
  16. Emerging roles of JMJD3 in cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2022
    Review
  17. Review
  18. Article
  19. LSD1 is required for euchromatic origin firing and replication timing.Signal transduction and targeted therapy · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Svetlana PetrukDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Jingli CaiDepartment of Neuroscience, Sidney Kimmel Medical College, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Robyn SussmanDepartment of Cancer Biology, Sidney Kimmel Medical College, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Guizhi SunDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Sina K KovermannDepartment of Zoology, University of British Columbia, 6270 University Boulevard, Vancouver, BC V6T 1Z4, Canada.
Samanta A MarianiDepartment of Cancer Biology, Sidney Kimmel Medical College, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Bruno CalabrettaDepartment of Cancer Biology, Sidney Kimmel Medical College, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Steven B McMahonDepartment of Cancer Biology, Sidney Kimmel Medical College, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107, USA.
Hugh W BrockDepartment of Zoology, University of British Columbia, 6270 University Boulevard, Vancouver, BC V6T 1Z4, Canada.
Lorraine IacovittiDepartment of Neuroscience, Sidney Kimmel Medical College, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107, USA. Electronic address: lorraine.iacovitti@jefferson.edu.
Alexander MazoDepartment of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA 19107, USA. Electronic address: alexander.mazo@jefferson.edu.
Thomas Jefferson University · USUniversity of British Columbia · CA

Funding

TRANSCRIPTIONAL REGULATION BY EPIGENETIC FACTORSR01GM075141 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI MAZO, ALEXANDER M · 2005 to 2021
$4.9M
Using reporter human iPS cells to study fate, function and Parkinson's diseaseR01NS075839 · NINDS · THOMAS JEFFERSON UNIVERSITY · PI IACOVITTI, LORRAINE · 2012 to 2021
$3.8M
The Role of the De-condensed Structure of Nascent Chromatin During T Cell DifferentiationR01AI125650 · NIAID · THOMAS JEFFERSON UNIVERSITY · PI IACOVITTI, LORRAINE, MAZO, ALEXANDER M · 2017 to 2021
$3.1M
The role of chromatin structure in differentiation of hematopoietic stem cellsR01HL127895 · NHLBI · THOMAS JEFFERSON UNIVERSITY · PI CALABRETTA, BRUNO, MAZO, ALEXANDER M · 2016 to 2019
$2.1M
Role of BAG1 in suppressing the intrinsic tumor suppressor activity of MYCR01CA164834 · NCI · THOMAS JEFFERSON UNIVERSITY · PI MCMAHON, STEVEN B. · 2013 to 2017
$1.6M
NCI NIH HHS R01 CA164834NHLBI NIH HHS R01 HL127895NIAID NIH HHS R01 AI125650NIGMS NIH HHS R01 GM075141NINDS NIH HHS R01 NS075839
6 · The paper itself

Abstract

Recruitment of transcription factors (TFs) to repressed genes in euchromatin is essential to activate new transcriptional programs during cell differentiation. However, recruitment of all TFs, including pioneer factors, is impeded by condensed H3K27me3-containing chromatin. Single-cell and gene-specific analyses revealed that, during the first hours of induction of differentiation of mammalian embryonic stem cells (ESCs), accumulation of the repressive histone mark H3K27me3 is delayed after DNA replication, indicative of a decondensed chromatin structure in all regions of the replicating genome. This delay provides a critical "window of opportunity" for recruitment of lineage-specific TFs to DNA. Increasing the levels of post-replicative H3K27me3 or preventing S phase entry inhibited recruitment of new TFs to DNA and significantly blocked cell differentiation. These findings suggest that recruitment of lineage-specifying TFs occurs soon after replication and is facilitated by a decondensed chromatin structure. This insight may explain the developmental plasticity of stem cells and facilitate their exploitation for therapeutic purposes.

Indexed as

Cell DifferentiationCell LineageChromatin Assembly and DisassemblyDNA ReplicationTranscription, GeneticAnimalsBinding SitesCell PlasticityChromatinDNADNA MethylationEmbryonic Stem CellsGene Expression Regulation, DevelopmentalHistone DemethylasesHistonesHumansChromatinDNAHistone DemethylasesHistonesKDM6A protein, humanNuclear ProteinsTranscription FactorsDNA replicationembryonic stem cellsH3K27me3HMTsKDMsnascent chromatinnascent DNAneuronal differentiationtranscription factors

Identifiers

PMID28410996
PMCPMC5412717
OpenAlexW2606492372

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.