Evidence map›Paper›PMID 28410364›Full record

ArticlePLoS genetics2017

Loss of Arf4 causes severe degeneration of the exocrine pancreas but not cystic kidney disease or retinal degeneration.

Jillian N Pearring, Jovenal T San Agustin, Ekaterina S Lobanova, Christopher J Gabriel, Eric C Lieu, William J Monis, Michael W Stuck, Lara Strittmatter, Samer M Jaber, Vadim Y Arshavsky and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Intrapancreatic fat, pancreatitis, and pancreatic cancer.Cellular and molecular life sciences : CMLS · 2023
    Review
  9. Article
  10. Review
  11. Functional compartmentalization of photoreceptor neurons.Pflugers Archiv : European journal of physiology · 2021
    Review
  12. Article
  13. Article
  14. Compartmentalization of Photoreceptor Sensory Cilia.Frontiers in cell and developmental biology · 2021
    Review
  15. Review
  16. ARF family GTPases with links to cilia.American journal of physiology. Cell physiology · 2020
    Review
  17. Review
  18. Article
  19. Protein phosphatase 1α interacts with a novel ciliary targeting sequence of polycystin-1 and regulates polycystin-1 trafficking.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jillian N PearringDepartment of Ophthalmology, Duke University School of Medicine, Durham, North Carolina, United States of America.ORCID 0000-0002-5352-2852
Jovenal T San AgustinProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.
Ekaterina S LobanovaDepartment of Ophthalmology, Duke University School of Medicine, Durham, North Carolina, United States of America.
Christopher J GabrielDepartment of Ophthalmology, Duke University School of Medicine, Durham, North Carolina, United States of America.ORCID 0000-0003-3193-2807
Eric C LieuDepartment of Ophthalmology, Duke University School of Medicine, Durham, North Carolina, United States of America.
William J MonisProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.
Michael W StuckProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.
Lara StrittmatterElectron Microscopy Core, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.
Samer M JaberDepartment of Animal Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.ORCID 0000-0003-3158-9367
Vadim Y ArshavskyDepartment of Ophthalmology, Duke University School of Medicine, Durham, North Carolina, United States of America.
Gregory J PazourProgram in Molecular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, United States of America.ORCID 0000-0002-6285-8796
University of Massachusetts Chan Medical School · USDuke University · US

Funding

Women's Cancer Research ProgramP30CA014236 · NCI · DUKE UNIVERSITY · PI DONNA NIEDZWIECKI · 1985 to 2026
$174.8M
Duke CTSA (Composite)UL1TR001117 · NCATS · DUKE UNIVERSITY · PI BOULWARE, LEIGH E, LI, JENNIFER S · 2013 to 2017
$41.3M
VISION RESEARCHP30EY005722 · NEI · DUKE UNIVERSITY · PI Vadim Y Arshavsky · 1985 to 2026
$19.3M
Intraflagellar Transport Proteins in MiceR01GM060992 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Gregory J Pazour · 2001 to 2026
$10.3M
Molecular mechanisms of photoreceptor outer segment morphogenesisR01EY012859 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI ARSHAVSKY, VADIM Y · 2000 to 2022
$10.0M
Trafficking of Cystoproteins to the Primary CiliumR01DK103632 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PAZOUR, GREGORY J · 2015 to 2019
$1.9M
Understanding Photoreceptor Trafficking Pathways to the Outer SegmentR00EY025732 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PEARRING, JILLIAN NYDAM · 2018 to 2020
$887k
Understanding Photoreceptor Trafficking Pathways to the Outer SegmentK99EY025732 · NEI · DUKE UNIVERSITY · PI PEARRING, JILLIAN NYDAM · 2015 to 2016
$237k
The Role of Arf4 in Sorting Photoreceptor Outer Segment ProteinsF32EY022508 · NEI · DUKE UNIVERSITY · PI PEARRING, JILLIAN NYDAM · 2012 to 2014
$156k
NCATS NIH HHS UL1 TR001117NCI NIH HHS P30 CA014236NEI NIH HHS F32 EY022508NEI NIH HHS K99 EY025732NEI NIH HHS P30 EY005722NEI NIH HHS R00 EY025732NEI NIH HHS R01 EY012859NIDDK NIH HHS R01 DK103632NIGMS NIH HHS R01 GM060992
6 · The paper itself

Abstract

Arf4 is proposed to be a critical regulator of membrane protein trafficking in early secretory pathway. More recently, Arf4 was also implicated in regulating ciliary trafficking, however, this has not been comprehensively tested in vivo. To directly address Arf4's role in ciliary transport, we deleted Arf4 specifically in either rod photoreceptor cells, kidney, or globally during the early postnatal period. Arf4 deletion in photoreceptors did not cause protein mislocalization or retinal degeneration, as expected if Arf4 played a role in protein transport to the ciliary outer segment. Likewise, Arf4 deletion in kidney did not cause cystic disease, as expected if Arf4 were involved in general ciliary trafficking. In contrast, global Arf4 deletion in the early postnatal period resulted in growth restriction, severe pancreatic degeneration and early death. These findings are consistent with Arf4 playing a critical role in endomembrane trafficking, particularly in the pancreas, but not in ciliary function.

Indexed as

ADP-Ribosylation FactorsAnimalsCiliaDisease Models, AnimalHumansKidneyKidney Diseases, CysticMiceMice, KnockoutNucleotide MotifsPancreas, ExocrinePhotoreceptor CellsRetinal DegenerationSequence DeletionADP-Ribosylation FactorsARF4 protein, mouse

Identifiers

PMID28410364
PMCPMC5409180
OpenAlexW2607200520

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.