Evidence map›Paper›PMID 28408749›Full record

ArticleExperimental & molecular medicine2017

High prevalence of TP53 mutations is associated with poor survival and an EMT signature in gliosarcoma patients.

Sung-Yup Cho, Changho Park, Deukchae Na, Jee Yun Han, Jieun Lee, Ok-Kyoung Park, Chengsheng Zhang, Chang Ohk Sung, Hyo Eun Moon, Yona Kim and 14 more

Open access · goldAbstract read
In one paragraph

Article in Experimental & molecular medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it, 67 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 7 institutions in 2 countries.

Sung-Yup ChoEwha Institute of Convergence Medicine, Ewha Womans University Mokdong Hospital, Seoul, Korea.
Changho ParkDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea.
Deukchae NaEwha Institute of Convergence Medicine, Ewha Womans University Mokdong Hospital, Seoul, Korea.
Jee Yun HanDepartment of Life Science, Ewha Womans University, Seoul, Korea.
Jieun LeeDepartment of Life Science, Ewha Womans University, Seoul, Korea.
Ok-Kyoung ParkDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea.
Chengsheng ZhangThe Jackson Laboratory for Genomic Medicine, Farmington, IL, USA.
Chang Ohk SungThe Jackson Laboratory for Genomic Medicine, Farmington, IL, USA.
Hyo Eun MoonDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul, Korea.
Yona KimDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul, Korea.
Jeong Hoon KimDepartment of Neurological Surgery, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Jong Jae KimDepartment of Pathology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Shin Kwang KhangDepartment of Pathology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Korea.
Do-Hyun NamDepartment of Health Sciences and Technology, Samsung Advanced Institute for Health Science and Technology (SAIHST), Sungkyunkwan University, Seoul, Korea.
Jung Won ChoiDepartment of Neurosurgery, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.
Yeon-Lim SuhDepartment of Pathology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Korea.
Dong Gyu KimDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul, Korea.
Sung Hye ParkDepartment of Pathology, Seoul National University Hospital, Seoul, Korea.
Hyewon YounCancer Research Institute, Seoul National University College of Medicine, Seoul, Korea.ORCID 0000-0003-1006-2689
Kyuson YunThe Jackson Laboratory, Bar Harbor, ME, USA.
Jong-Il KimDepartment of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Korea.ORCID 0000-0002-7240-3744
Charles LeeDepartment of Life Science, Ewha Womans University, Seoul, Korea.
Sun Ha PaekDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul, Korea.
Hansoo ParkDepartment of Biomedical Science and Engineering, Gwangju Institute of Science and Technology (GIST), Gwangju, Korea.
Seoul National University · KREwha Womans University · KRUlsan College · KRJackson Laboratory · USSamsung Medical Center · KRGwangju Institute of Science and Technology · KRSamsung (South Korea) · KR

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
NCI NIH HHS P30 CA034196
6 · The paper itself

Abstract

Gliosarcoma (GS) is a rare variant (2%) of glioblastoma (GBM) that poses clinical genomic challenges because of its poor prognosis and limited genomic information. To gain a comprehensive view of the genomic alterations in GS and to understand the molecular etiology of GS, we applied whole-exome sequencing analyses for 28 GS cases (6 blood-matched fresh-frozen tissues for the discovery set, 22 formalin-fixed paraffin-embedded tissues for the validation set) and copy-number variation microarrays for 5 blood-matched fresh-frozen tissues. TP53 mutations were more prevalent in the GS cases (20/28, 70%) compared to the GBM cases (29/90, 32%), and the GS patients with TP53 mutations showed a significantly shorter survival (multivariate Cox analysis, hazard ratio=23.9, 95% confidence interval, 2.87-199.63, P=0.003). A pathway analysis showed recurrent alterations in MAPK signaling (EGFR, RASGRF2 and TP53), phosphatidylinositol/calcium signaling (CACNA1s, PLCs and ITPRs) and focal adhesion/tight junction (PTEN and PAK3) pathways. Genomic profiling of the matched recurrent GS cases detected the occurrence of TP53 mutations in two recurrent GS cases, which suggests that TP53 mutations play a role in treatment resistance. Functionally, we found that TP53 mutations are associated with the epithelial-mesenchymal transition (EMT) process of sarcomatous components of GS. We provide the first comprehensive genome-wide genetic alternation profiling of GS, which suggests novel prognostic subgroups in GS patients based on their TP53 mutation status and provides new insight in the pathogenesis and targeted treatment of GS.

Indexed as

MutationBiomarkers, TumorBrain NeoplasmsCalcium SignalingCell Line, TumorEpithelial-Mesenchymal TransitionFemaleGliosarcomaHumansMaleMAP Kinase Signaling SystemMiddle AgedTight JunctionsTumor Suppressor Protein p53Biomarkers, TumorTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID28408749
PMCPMC5420801
OpenAlexW2605601286

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.