Evidence map›Paper›PMID 28407767›Full record

ArticleLipids in health and disease2017

E167K polymorphism of TM6SF2 gene affects cell cycle of hepatocellular carcinoma cell HEPA 1-6.

Shuixian Du, Linlin Lu, Yingxia Miao, Wenwen Jin, Changfei Li, Yongning Xin, Shiying Xuan

Open access · goldAbstract read
In one paragraph

Article in Lipids in health and disease, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 10 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Deep metabolic phenotyping of humans with protein-altering variants inJHEP reports : innovation in hepatology · 2025
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. [Research progress of single-nucleotide polymorphism in theTM6SF2 rs58542926].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2019
    Review
  10. The Genetics of Clinical Liver Diseases: Insight into theJournal of clinical and translational hepatology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Shuixian DuMedical College of Qingdao University, Qingdao, 266071, China. 15866813623@163.com.
Linlin LuDepartment of Gastroenterology, Qingdao Municipal Hospital, 1 Jiaozhou Road, Qingdao, Shandong Province, 266011, China.
Yingxia MiaoMedical College of Qingdao University, Qingdao, 266071, China.
Wenwen JinDepartment of Gastroenterology, Qingdao Municipal Hospital, 1 Jiaozhou Road, Qingdao, Shandong Province, 266011, China.
Changfei LiMedical College of Qingdao University, Qingdao, 266071, China.
Yongning XinMedical College of Qingdao University, Qingdao, 266071, China. xinyongning1@163.com.
Shiying XuanMedical College of Qingdao University, Qingdao, 266071, China.
Qingdao University · CNQingdao Municipal Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSome studties reported that the polymorphism of TM6SF2 gene E167K affects the occurrence and the progression of hepatocytes carcinoma (hepatocellular, HCC). In oeder to investigate the effects of the polymorphism of TM6SF2 gene E167K in the pathogenesis of HCC, we explored its influence on the cell cycle in hepatocellular carcinoma cell HEPA1-6.

methodsHEPA 1-6 cells which could respectively overexpress TM6SF2 wild type and E167K variant were cultured and HEPA 1-6 cells with zero load plasmids were used as matched control. Flow cytometry was used to detect the cell cycles of these 3 type of HEPA 1-6 cells. Realtime fluores-cence quantitative PCR and western blot were used to analyzed the expression of regulatory factors (Cyclin D1、p53、P16、P27、P21 and Rb) of cell cycle. T-test was used in statistical analysis.

resultsCell cycle phase distribution was presented by the proportion of cells in each phases (%). Compared with the control group, the cell cycle phase distribution (G

conclusionE167K polymorphism of TM6SF2 gene affects cell cycles of HEPA1-6 cells via up-regulating CyclinD1、P53 and Rb and down-regulating P27.

Indexed as

Gene Expression Regulation, NeoplasticPolymorphism, GeneticAmino Acid SubstitutionCarcinoma, HepatocellularCell CycleCell Line, TumorCyclin D1Cyclin-Dependent Kinase Inhibitor p27HumansLiver NeoplasmsMembrane ProteinsNeoplasm ProteinsRecombinant ProteinsRepressor ProteinsRNA, MessengerTumor Suppressor Protein p53CCND1 protein, humanCDKN1B protein, humanCyclin D1Cyclin-Dependent Kinase Inhibitor p27Membrane ProteinsNeoplasm ProteinsRecombinant ProteinsRepressor ProteinsRNA, MessengerTM6SF2 protein, humanTP53 protein, humanTumor Suppressor Protein p53Cell cycleHepatocellular carcinoma cell (HCC)PcrTM6SF2 E167K polymorphismWestern blot

Identifiers

PMID28407767
PMCPMC5390375
OpenAlexW2605914172

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.