Evidence map›Paper›PMID 28407149›Full record

ArticleThe Journal of infectious diseases2017

Determination of the Biological Form of Human Cytomegalovirus DNA in the Plasma of Solid-Organ Transplant Recipients.

Yupin Tong, Xiaoli L Pang, Curtis Mabilangan, Jutta K Preiksaitis

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Human cytomegalovirus and neonatal infection.Current research in microbial sciences · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Definitions of Resistant and Refractory Cytomegalovirus Infection and Disease in Transplant Recipients for Use in Clinical Trials.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Cost minimization analysis of an in-house molecular test for cytomegalovirus in relation to a commercial molecular system.The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Yupin TongDivision of Infectious Diseases, Department of Medicine, and.
Xiaoli L PangDepartment of Laboratory Medicine and Pathology, University of Alberta, Edmonton, and.
Curtis MabilanganDivision of Infectious Diseases, Department of Medicine, and.
Jutta K PreiksaitisDivision of Infectious Diseases, Department of Medicine, and.
Office of Infectious Diseases · USProvincial Laboratory of Public Health · CA

Funding

Novel Mechanisms of Quinone ToxicityR01ES018943 · NIEHS · UNIVERSITY OF COLORADO DENVER · PI ROSS, DAVID · 2010 to 2014
$1.7M
NIEHS NIH HHS R01 ES018943
6 · The paper itself

Abstract

Background: Whether cytomegalovirus (CMV) DNA exists in plasma as virion-associated or free DNA is uncertain. Methods: An assay combining DNase I digestion and CMV quantitative polymerase chain reaction (DNase-CMV-qPCR) was developed to differentiate free naked DNA from virion DNA. One hundred three frozen and 10 fresh CMV DNA-positive plasma samples from solid-organ transplant recipients (SOTRs) were tested. Three sets of paired qPCR (P-qPCR) assays with amplicons of variable length were used to study CMV DNA fragmentation in 20 SOTR plasma samples, viral stocks (Towne, Merlin, AD169) and the first World Health Organization (WHO) international standard (IS) for CMV DNA. Results: In all plasma samples, 98.8%-100% of CMV DNA was free DNA; this was the only form in 93 of 103 (90.3%) frozen and all 10 fresh samples tested using DNase-CMV-qPCR. Low levels of virion CMV DNA were found in 10 of 103 (9.7%) samples with higher total DNA load. Cytomegalovirus DNA results were highly reproducible for 3 CMV virus stocks and WHO IS (P > .80), tested by three sets of paired q-PCR. However, for the 20 SOTR plasma samples, the smaller amplicon assay result was 2.6-fold, 3.4-fold, and 6.5-fold higher than the longer amplicion result (P < .001). Conclusions: Cytomegalovirus DNA in SOTR plasma is almost exclusively free DNA, highly fragmented, and not virion associated.

Indexed as

Transplant RecipientsAdolescentAdultAgedAntigens, ViralChildChild, PreschoolCytomegalovirusDNA, ViralFemaleHumansMaleMiddle AgedOrgan TransplantationReal-Time Polymerase Chain ReactionViral LoadAntigens, ViralDNA, ViralCMV DNA fragmentationcytomegalovirusDNase Ifree CMV DNAplasma CMV DNAQuantitative PCR.virion-associated DNA

Identifiers

PMID28407149
PMCPMC6455021
OpenAlexW2606935075

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.