Evidence map›Paper›PMID 28407095›Full record

ArticleRheumatology (Oxford, England)2017

Genetic and environmental risk factors for rheumatoid arthritis in a UK African ancestry population: the GENRA case-control study.

Matthew Traylor, Charles Curtis, Hamel Patel, Gerome Breen, Sang Hyuck Lee, Xiaohui Xu, Stephen Newhouse, Richard Dobson, Sophia Steer, Andrew P Cope and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Rheumatology (Oxford, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Genetics of rheumatoid arthritis.Seminars in immunopathology · 2022
    Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Matthew TraylorDepartment of Medical and Molecular Genetics, King's College London.
Charles CurtisSGDP Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London.
Hamel PatelSGDP Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London.
Gerome BreenSGDP Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London.
Sang Hyuck LeeSGDP Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London.
Xiaohui XuSGDP Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London.
Stephen NewhouseSGDP Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London.
Richard DobsonSGDP Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London.
Sophia SteerDepartment of Rheumatology, King's College Hospital.
Andrew P CopeAcademic Department of Rheumatology, Centre for Molecular and Cellular Biology of Inflammation, King's College London, London.
Hugh S MarkusDepartment of Clinical Neurosciences, Neurology Unit, University of Cambridge, Cambridge, UK.
Cathryn M LewisDepartment of Medical and Molecular Genetics, King's College London.
Ian C ScottDepartment of Medical and Molecular Genetics, King's College London.
King's College London · GBKing's College Hospital · GBUniversity of Cambridge · GB

Funding

Medical Research Council G1001516Versus Arthritis 19739Versus Arthritis 20525Wellcome TrustWellcome Trust 076113Wellcome Trust 085475Wellcome Trust 090355
6 · The paper itself

Abstract

Objectives: To evaluate whether genetic and environmental factors associated with RA in European and Asian ancestry populations are also associated with RA in African ancestry individuals. Methods: A case-control study was undertaken in 197 RA cases and 868 controls of African ancestry (Black African, Black Caribbean or Black British ethnicity) from South London. Smoking and alcohol consumption data at RA diagnosis was captured. Genotyping was undertaken (Multi-Ethnic Genotyping Array) and human leukocyte antigen (HLA) alleles imputed. The following European/Asian RA susceptibility factors were tested: 99 genome-wide loci combined into a genetic risk score; HLA region [20 haplotypes; shared epitope (SE)]; smoking; and alcohol consumption. The SE was tested for its association with radiological erosions. Logistic regression models were used, including ancestry-informative principal components, to control for admixture. Results: European/Asian susceptibility loci were associated with RA in African ancestry individuals. The genetic risk score provided an odds ratio (OR) for RA of 1.53 (95% CI: 1.31, 1.79; P = 1.3 × 10 - 7 ). HLA haplotype ORs in European and African ancestry individuals were highly correlated ( r = 0.83, 95% CI: 0.56, 0.94; P = 1.1 × 10 - 4 ). Ever-smoking increased (OR = 2.36, 95% CI: 1.46, 3.82; P = 4.6 × 10 - 4 ) and drinking alcohol reduced (OR = 0.34, 95% CI: 0.20, 0.56; P = 2.7 × 10 - 5 ) RA risk in African ancestry individuals. The SE was associated with erosions (OR = 2.61, 95% CI: 1.36, 5.01; P = 3.9 × 10 - 3 ). Conclusion: Gene-environment RA risk factors identified in European/Asian ancestry populations are relevant in African ancestry individuals. As modern statistical methods facilitate analysing ancestrally diverse populations, future genetic studies should incorporate African ancestry individuals to ensure their implications for precision medicine are universally applicable.

Indexed as

AdultAgedAlcohol DrinkingArthritis, RheumatoidAsian PeopleBlack PeopleCase-Control StudiesEpitopesFemaleGene-Environment InteractionGenetic Predisposition to DiseaseGenotypeHaplotypesHLA AntigensHumansLogistic ModelsEpitopesHLA AntigensAfrican continental ancestry grouparthritisgenetic susceptibilityrheumatoidsmoking

Identifiers

PMID28407095
PMCPMC5638023
OpenAlexW2584381311

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.