Evidence map›Paper›PMID 28407010›Full record

ArticlePloS one2017

Comparative molecular cytogenetic characterization of seven Deschampsia (Poaceae) species.

Alexandra V Amosova, Nadezhda L Bolsheva, Svyatoslav A Zoshchuk, Maryana O Twardovska, Olga Yu Yurkevich, Igor O Andreev, Tatiana E Samatadze, Ekaterina D Badaeva, Viktor A Kunakh, Olga V Muravenko

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Genetic Diversity of the Species of the GenusInternational journal of molecular sciences · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Cytogenomics ofPlants (Basel, Switzerland) · 2021
    Article
  7. Chromosomal Differentiation ofFrontiers in genetics · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Alexandra V AmosovaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russian Federation.ORCID http://orcid.org/0000-0002-5208-6702
Nadezhda L BolshevaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russian Federation.
Svyatoslav A ZoshchukEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russian Federation.
Maryana O TwardovskaInstitute of Molecular Biology and Genetics, National Academy of Sciences of Ukraine, Kyiv, Ukraine.
Olga Yu YurkevichEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russian Federation.
Igor O AndreevInstitute of Molecular Biology and Genetics, National Academy of Sciences of Ukraine, Kyiv, Ukraine.
Tatiana E SamatadzeEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russian Federation.
Ekaterina D BadaevaEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russian Federation.
Viktor A KunakhInstitute of Molecular Biology and Genetics, National Academy of Sciences of Ukraine, Kyiv, Ukraine.
Olga V MuravenkoEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russian Federation.
Engelhardt Institute of Molecular Biology · RUNational Academy of Sciences of Ukraine · UA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genus Deschampsia P. Beauv (Poaceae) involves a group of widespread polymorphic species. Some of them are highly tolerant to stressful and variable environmental conditions, and D. antarctica is one of the only two vascular plants growing in Antarctic. This species is a source of useful for selection traits and a valuable model for studying an environmental stress tolerance in plants. Genome diversity and comparative chromosomal phylogeny within the genus have not been studied yet as karyotypes of most Deschampsia species are poorly investigated. We firstly conducted a comparative molecular cytogenetic analysis of D. antarctica (Antarctic Peninsula) and related species from various localities (D. cespitosa, D. danthonioides, D. elongata, D. flexuosa (= Avenella flexuosa), D. parvula and D. sukatschewii by fluorescence in situ hybridization with 45S and 5S rDNA, DAPI-banding and sequential rapid in situ hybridization with genomic DNA of D. antarctica, D. cespitosa, and D. flexuosa. Based on patterns of distribution of the examined markers, chromosomes of the studied species were identified. Within these species, common features as well as species peculiarities in their karyotypic structure and chromosomal distribution of molecular cytogenetic markers were characterized. Different chromosomal rearrangements were detected in D. antarctica, D. flexuosa, D. elongata and D. sukatschewii. In karyotypes of D. antarctica, D. cespitosa, D. elongata and D. sukatschewii, 0-3 B chromosomes possessed distinct DAPI-bands were observed. Our findings suggest that the genome evolution of the genus Deschampsia involved polyploidy and also different chromosomal rearrangements. The obtained results will help clarify the relationships within the genus Deschampsia, and can be a basis for the further genetic and biotechnological studies as well as for selection of plants tolerant to extreme habitats.

Indexed as

Antarctic RegionsChromosome AberrationsChromosome BandingChromosomes, PlantCytogenetic AnalysisDNA, RibosomalGenetic VariationIn Situ Hybridization, FluorescenceKaryotypingPoaceaePolyploidyDNA, Ribosomal

Identifiers

PMID28407010
PMCPMC5391082
OpenAlexW2606816798

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.