Evidence map›Paper›PMID 28406615›Full record

ArticleBiochemistry2017

Redox-Sensitive MarR Homologue BifR from Burkholderia thailandensis Regulates Biofilm Formation.

Ashish Gupta, Stanley M Fuentes, Anne Grove

Abstract read
In one paragraph

Article in Biochemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. MarR Family Transcription Factors fromMicrobiology and molecular biology reviews : MMBR · 2019
    Review
  7. An EmrB multidrug efflux pump inThe Journal of biological chemistry · 2019
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ashish GuptaDepartment of Biological Sciences, Louisiana State University , Baton Rouge, Louisiana 70803, United States.ORCID 0000-0002-1800-2755
Stanley M FuentesDepartment of Biological Sciences, Louisiana State University , Baton Rouge, Louisiana 70803, United States.
Anne GroveDepartment of Biological Sciences, Louisiana State University , Baton Rouge, Louisiana 70803, United States.ORCID 0000-0002-4390-0354
Louisiana State University · US

Funding

Bacterial gene regulation in response to oxidative stressR15GM107825 · NIGMS · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI GROVE, ANNE · 2013 to 2013
$318k
NIGMS NIH HHS R15 GM107825
6 · The paper itself

Abstract

Biofilm formation by pathogenic Burkholderia species is a serious complication as it renders the bacteria resistant to antibiotics and host defenses. Using B. thailandensis, we report here a novel redox-sensitive member of the multiple antibiotic resistance regulator (MarR) protein family, BifR, which represses biofilm formation. BifR is encoded as part of the emrB-bifR operon; emrB-bifR is divergent to ecsC, which encodes a putative LasA protease. In Pseudomonas aeruginosa, LasA has been implicated in virulence by contributing to cleavage of elastase. BifR repressed the expression of ecsC and emrB-bifR, and expression was further repressed under oxidizing conditions. BifR bound two sites in the intergenic region between ecsC and emrB-bifR with nanomolar affinity under both reducing and oxidizing conditions; however, oxidized BifR formed a disulfide-linked dimer-of-dimers, a covalent linkage that was absent in BifR-C104A in which the redox-active cysteine was replaced with alanine. BifR also repressed an operon encoding enzymes required for synthesis of phenazine antibiotics, which function as alternate respiratory electron receptors, and inactivation of bifR resulted in enhanced biofilm formation. Taken together, our data suggest that BifR functions to control LasA production and expression of genes involved in biofilm formation, in part by regulating synthesis of alternate electron acceptors that promote survival in the oxygen-limiting environment of a biofilm. The correlation between increased repression of emrB-bifR under oxidative conditions and the formation of a covalently linked BifR dimer-of-dimers suggests that BifR may modulate gene activity in response to cellular redox state.

Indexed as

Models, BiologicalATP-Binding Cassette TransportersBacterial ProteinsBiofilmsBurkholderiaCysteineCystineDimerizationDNA, IntergenicEnzyme StabilityGene DeletionGene Expression Regulation, BacterialHot TemperatureMetalloproteasesMutationOperonATP-Binding Cassette TransportersBacterial ProteinsCysteineCystineDNA, IntergenicMetalloproteasesPeptide FragmentsRecombinant Fusion ProteinsRecombinant ProteinsVirulence Factors

Identifiers

PMID28406615
PMCPMC5565208
OpenAlexW2605925759

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.