Evidence map›Paper›PMID 28406606›Full record

ArticleAnalytical chemistry2017

Characterization of Complete Histone Tail Proteoforms Using Differential Ion Mobility Spectrometry.

Pavel V Shliaha, Matthew A Baird, Mogens M Nielsen, Vladimir Gorshkov, Andrew P Bowman, Julia L Kaszycki, Ole N Jensen, Alexandre A Shvartsburg

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Pavel V ShliahaDepartment of Biochemistry and Molecular Biology, VILLUM Center for Bioanalytical Sciences, and Center for Epigenetics, University of Southern Denmark , DK-5230 Odense M, Denmark.
Matthew A BairdDepartment of Chemistry, Wichita State University , 1845 Fairmount, Wichita, Kansas 67260, United States.
Mogens M NielsenDepartment of Biochemistry and Molecular Biology, VILLUM Center for Bioanalytical Sciences, and Center for Epigenetics, University of Southern Denmark , DK-5230 Odense M, Denmark.
Vladimir GorshkovDepartment of Biochemistry and Molecular Biology, VILLUM Center for Bioanalytical Sciences, and Center for Epigenetics, University of Southern Denmark , DK-5230 Odense M, Denmark.ORCID 0000-0003-0170-5785
Andrew P BowmanDepartment of Chemistry, Wichita State University , 1845 Fairmount, Wichita, Kansas 67260, United States.
Julia L KaszyckiDepartment of Chemistry, Wichita State University , 1845 Fairmount, Wichita, Kansas 67260, United States.
Ole N JensenDepartment of Biochemistry and Molecular Biology, VILLUM Center for Bioanalytical Sciences, and Center for Epigenetics, University of Southern Denmark , DK-5230 Odense M, Denmark.ORCID 0000-0003-1862-8528
Alexandre A ShvartsburgDepartment of Chemistry, Wichita State University , 1845 Fairmount, Wichita, Kansas 67260, United States.
University of Southern Denmark · DKWichita State University · US

Funding

Protein Structure Laboratory P30GM110761 · NIGMS · UNIVERSITY OF KANSAS LAWRENCE · PI HANZLIK, ROBERT P · 2014 to 2018
$5.6M
NIGMS NIH HHS P30 GM110761
6 · The paper itself

Abstract

Histone proteins are subject to dynamic post-translational modifications (PTMs) that cooperatively modulate the chromatin structure and function. Nearly all functional PTMs are found on the N-terminal histone domains (tails) of ∼50 residues protruding from the nucleosome core. Using high-definition differential ion mobility spectrometry (FAIMS) with electron transfer dissociation, we demonstrate rapid baseline gas-phase separation and identification of tails involving monomethylation, trimethylation, acetylation, or phosphorylation in biologically relevant positions. These are by far the largest variant peptides resolved by any method, some with PTM contributing just 0.25% to the mass. This opens the door to similar separations for intact proteins and in top-down proteomics.

Indexed as

AcetylationAmino Acid SequenceHistonesIon Mobility SpectrometryMethylationPeptidesPhosphorylationProteomicsHistonesPeptides

Identifiers

PMID28406606
PMCPMC5436587
OpenAlexW2607091042

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.