Evidence map›Paper›PMID 28406161›Full record

ArticleScientific reports2017

Ribosomal background of the Bacillus cereus group thermotypes.

Krzysztof Fiedoruk, Justyna M Drewnowska, Tamara Daniluk, Katarzyna Leszczynska, Piotr Iwaniuk, Izabela Swiecicka

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  7. Competitive and/or Cooperative Interactions ofFrontiers in microbiology · 2020
    Article
  8. Article
  9. Genes Associated With PsychrotolerantFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Krzysztof FiedorukDepartment of Microbiology, Medical University of Bialystok, Bialystok, Poland.
Justyna M DrewnowskaDepartment of Microbiology, Institute of Biology, University of Bialystok, Bialystok, Poland.
Tamara DanilukDepartment of Microbiology, Medical University of Bialystok, Bialystok, Poland.
Katarzyna LeszczynskaDepartment of Microbiology, Medical University of Bialystok, Bialystok, Poland.
Piotr IwaniukDepartment of Microbiology, Institute of Biology, University of Bialystok, Bialystok, Poland.
Izabela SwiecickaDepartment of Microbiology, Institute of Biology, University of Bialystok, Bialystok, Poland.
Medical University of Białystok · PLUniversity of Białystok · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study we reconstructed the architecture of Bacillus cereus sensu lato population based on ribosomal proteins, and identified a link between the ribosomal proteins' variants and thermal groups (thermotypes) of the bacilli. The in silico phyloproteomic analysis of 55 ribosomal proteins (34 large and 21 small subunit r-proteins) of 421 strains, representing 14 well-established or plausible B. cereus sensu lato species, revealed several ribosomal clusters (r-clusters), which in general were well correlated with the strains' affiliation to phylogenetic/thermal groups I-VII. However, a conformity and possibly a thermal characteristic of certain phylogenetic groups, e.g. the group IV, were not supported by a distribution of the corresponding r-clusters, and consequently neither by the analysis of cold-shock proteins (CSPs) nor by a content of heat shock proteins (HSPs). Furthermore, a preference for isoleucine and serine over valine and alanine in r-proteins along with a lack of HSP16.4 were recognized in non-mesophilic thermotypes. In conclusion, we suggest that the observed divergence in ribosomal proteins may be connected with an adaptation of B. cereus sensu lato members to various thermal niches.

Indexed as

Adaptation, PhysiologicalBacillus cereusBacterial ProteinsComputer SimulationGenetic VariationPhylogenyProteomicsRibosomal ProteinsRibosomesBacterial ProteinsRibosomal Proteins

Identifiers

PMID28406161
PMCPMC5390287
OpenAlexW2607219474

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.