Evidence map›Paper›PMID 28404884›Full record

ArticleOncotarget2017

DFNA5 promoter methylation a marker for breast tumorigenesis.

Lieselot Croes, Ken Op de Beeck, Patrick Pauwels, Wim Vanden Berghe, Marc Peeters, Erik Fransen, Guy Van Camp

Abstract read
In one paragraph

Article in Oncotarget, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Review
  2. Pyroptosis: Turning Up the Heat on Cancer.Annual review of immunology · 2026
    Review
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  5. Epigenetics · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lieselot CroesCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Edegem B-2650, Belgium.
Ken Op de BeeckCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Edegem B-2650, Belgium.
Patrick PauwelsCenter for Oncological Research, University of Antwerp and Antwerp University Hospital, Edegem B-2650, Belgium.
Wim Vanden BergheLaboratory of Protein Chemistry, Proteomics and Epigenetic Signaling (PPES), Antwerp B-2610, Belgium.
Marc PeetersCenter for Oncological Research, University of Antwerp and Antwerp University Hospital, Edegem B-2650, Belgium.
Erik FransenCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Edegem B-2650, Belgium.
Guy Van CampCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Edegem B-2650, Belgium.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIdentification of methylation markers that are sensitive and specific for breast cancer may improve early detection. We hypothesize that DFNA5 promoter methylation can be a valuable epigenetic biomarker, based upon strong indications for its role as tumor suppressor gene and its function in regulated cell death.

resultsStatistically different levels of methylation were seen, with always very low levels in healthy breast reduction samples, very high levels in part of the adenocarcinoma samples and slightly increased levels in part of the normal tissue samples adjacent the tumor. One of the CpGs (CpG4) showed the best differentiation. A ROC curve for DFNA5 CpG4 methylation showed a sensitivity of 61.8% for the detection of breast cancer with a specificity of 100%. MATERIALS AND

methodsWe performed methylation analysis on four CpGs in the DFNA5 promoter region by bisulfite pyrosequencing on 123 primary breast adenocarcinomas and 24 healthy breast reductions. For 16 primary tumors, corresponding histological normal tissue adjacent to the tumor was available.

conclusionsWe conclude that DFNA5 methylation shows strong potential as a biomarker for detection of breast cancer. Slightly increased methylation in histologically normal breast tissue surrounding the tumor suggests that it may be a good early detection marker.

Indexed as

Biomarkers, TumorDNA MethylationPromoter Regions, GeneticAdenocarcinomaAdultAgedAged, 80 and overBreast NeoplasmsCase-Control StudiesCell Line, TumorCell Transformation, NeoplasticCpG IslandsEpigenesis, GeneticFemaleGene Expression Regulation, NeoplasticHearing Loss, SensorineuralBiomarkers, Tumorbiomarkerbreast cancerdetectionDFNA5DNA methylation

Identifiers

PMID28404884
PMCPMC5458261

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.