Evidence map›Paper›PMID 28404846›Full record

ArticleJournal of virology2017

Double Plant Homeodomain Fingers 2 (DPF2) Promotes the Immune Escape of Influenza Virus by Suppressing Beta Interferon Production.

Dongjo Shin, Jihye Lee, Ji Hoon Park, Ji-Young Min

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Dongjo ShinRespiratory Viruses Research Laboratory, Discovery Biology Department, Institut Pasteur Korea, Gyeonggi-do, Republic of Korea.
Jihye LeeRespiratory Viruses Research Laboratory, Discovery Biology Department, Institut Pasteur Korea, Gyeonggi-do, Republic of Korea.
Ji Hoon ParkRespiratory Viruses Research Laboratory, Discovery Biology Department, Institut Pasteur Korea, Gyeonggi-do, Republic of Korea.
Ji-Young MinRespiratory Viruses Research Laboratory, Discovery Biology Department, Institut Pasteur Korea, Gyeonggi-do, Republic of Korea jiyoung.min@ip-korea.org.
Institut Pasteur Korea · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The high mutation rates of the influenza virus genome facilitate the generation of viral escape mutants, rendering vaccines and drugs against influenza virus-encoded targets potentially ineffective. Therefore, we identified host cell determinants dispensable for the host but crucial for virus replication, with the goal of preventing viral escape and finding effective antivirals. To identify these host factors, we screened 2,732 human genes using RNA interference and focused on one of the identified host factors, the double plant homeodomain fingers 2 (DPF2/REQ) gene, for this study. We found that knockdown of DPF2 in cells infected with influenza virus resulted in decreased expression of viral proteins and RNA. Furthermore, production of progeny virus was reduced by two logs in the multiple-cycle growth kinetics assay. We also found that DPF2 was involved in the replication of seasonal influenza A and B viruses. Because DPF2 plays a crucial role in the noncanonical NF-κB pathway, which negatively regulates type I interferon (IFN) induction, we examined the relationship between DPF2 and IFN responses during viral infection. The results showed that knockdown of DPF2 resulted in increased expression of IFN-β and induced phosphorylation of STAT1 in infected cells. In addition, high levels of several cytokines/chemokines (interleukin-8 [IL-8], IP-10, and IL-6) and antiviral proteins (MxA and ISG56) were produced by DPF2 knockdown cells. In conclusion, we identified a novel host factor, DPF2, that is required for influenza virus to evade the host immune response and that may serve as a potential antiviral target.

Indexed as

Host-Pathogen InteractionsImmune EvasionAdaptor Proteins, Signal TransducingAmino Acid MotifsCell LineChemokine CXCL10DNA-Binding ProteinsHumansImmunity, InnateInfluenza A virusInterferon-betaInterferon Type IInterleukin-6Interleukin-8KineticsMyxovirus Resistance ProteinsAdaptor Proteins, Signal TransducingChemokine CXCL10CXCL10 protein, humanCXCL8 protein, humanDNA-Binding ProteinsDPF2 protein, humanIFIT1 protein, humanIL6 protein, humanInterferon-betaInterferon Type IInterleukin-6Interleukin-8MX1 protein, humanMyxovirus Resistance ProteinsNF-kappa BRNA-Binding ProteinsSTAT1 protein, humanSTAT1 Transcription FactorTranscription FactorsDPF2immune escapeinfluenza virusinterferon

Identifiers

PMID28404846
PMCPMC5446637
OpenAlexW2606208840

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.