Evidence map›Paper›PMID 28402408›Full record

Trial reportClinical infectious diseases : an official publication of the Infectious Diseases Society of America2017

Gut Microbial Diversity in Antibiotic-Naive Children After Systemic Antibiotic Exposure: A Randomized Controlled Trial.

Thuy Doan, Ahmed M Arzika, Kathryn J Ray, Sun Y Cotter, Jessica Kim, Ramatou Maliki, Lina Zhong, Zhaoxia Zhou, Travis C Porco, Benjamin Vanderschelden and 2 more

Registry-linked trialOpen access · bronzeAbstract readRandomized Controlled Trial
In one paragraph

Trial report in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02048007 (Evaluating Impact of Azithromycin Mass Drug Administrations on All-cause Mortality and Antibiotic Resistance), which is not on this map. Cited by 56 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed, 4 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02048007 phase4completednot on this map

Evaluating Impact of Azithromycin Mass Drug Administrations on All-cause Mortality and Antibiotic Resistance: Morbidity Study

TypeinterventionalSponsorUniversity of California, San FranciscoRan2014 to 2020Enrolled72,000ConditionsChildhood MortalityArmsAzithromycin, Placebo
3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 4 syntheses or guidelines pooled it, 86 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Effect of one prophylactic dose of azithromycin on Bifidobacterium infantis colonization in infants from the Mumta trial.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2025
    Trial
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  9. Gut Bacterial Diversity and Growth among Preschool Children in Burkina Faso.The American journal of tropical medicine and hygiene · 2020
    Trial
  10. Rapid Reduction ofThe American journal of tropical medicine and hygiene · 2020
    Trial
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Thuy DoanFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Ahmed M ArzikaThe Carter Center Niger, Republique du Niger.
Kathryn J RayFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Sun Y CotterFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Jessica KimFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Ramatou MalikiThe Carter Center Niger, Republique du Niger.
Lina ZhongFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Zhaoxia ZhouFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Travis C PorcoFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Benjamin VanderscheldenFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Jeremy D KeenanFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Thomas M LietmanFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Cancer Research And Biostatistics · USUnited Nations Children's Fund Niger · NE

Funding

Ocular Surface Microbiome, Virome, and Pathogens in Ophthalmic Disease and HealthK08EY026986 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DOAN, THUY A · 2016 to 2020
$1.2M
NEI NIH HHS K08 EY026986
6 · The paper itself

Abstract

Background: Antibiotic exposure can alter the gut microbiome. We evaluate the effects of azithromycin on the gut microbiome diversity of children from an antibiotic-naive community in Niger. Methods: A population-based sample of 80 children aged 1-60 months in the Dosso region of Niger was randomized to receive a single dose of either oral azithromycin or placebo. Fecal samples were collected immediately before treatment and 5 days after treatment for 16S rRNA gene sequencing. The prespecified outcome was α-diversity (inverse Simpson's α-diversity index), with secondary outcomes of β and γ Simpson's and Shannon's diversities. Results: At 5 days after treatment, 40 children aged 1-60 months were analyzed in the azithromycin-treated group and 40 children in the placebo-treated group. Diversity of the gut microbiome was significantly lower in the treated group (inverse Simpson's α-diversity, 5.03; 95% confidence interval [CI], 4.08-6.14) than in the placebo group (6.91; 95% CI, 5.82-8.21; P = .03). Similarly, the Shannon's α-diversity was lower in the treated group (10.60; 95% CI, 8.82-12.36) than the placebo group (15.42; 95% CI, 13.24-17.80; P = .004). Simpson's community-level (γ) diversity decreased with azithromycin exposure from 17.72 (95% CI, 13.80-20.21) to 10.10 (95% CI, 7.80-11.40; P = .00008), although β-diversity was not significantly reduced (2.56, 95% CI, 1.88-3.12; to 2.01, 95% CI, 1.46-2.51; P = .26). Conclusions: Oral administration of azithromycin definitively decreases the diversity of the gut microbiome of children in an antibiotic-naive community. Clinical Trials Registration: NCT02048007.

Indexed as

Administration, OralAnti-Bacterial AgentsAzithromycinBacteriaBiodiversityChild, PreschoolCluster AnalysisDNA, RibosomalFemaleGastrointestinal MicrobiomeGastrointestinal TractHumansInfantMaleNigerPhylogenyAnti-Bacterial AgentsAzithromycinDNA, RibosomalPlacebosRNA, Ribosomal, 16Santibiotics.azithromycinchildrengut microbiomerandomized controlled trial

Identifiers

PMID28402408
PMCPMC5849050
OpenAlexW2606503898

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.