Evidence map›Paper›PMID 28401650›Full record

ArticleAging cell2017

Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity.

George L Sutphin, Grant Backer, Susan Sheehan, Shannon Bean, Caroline Corban, Teresa Liu, Marjolein J Peters, Joyce B J van Meurs, Joanne M Murabito, Andrew D Johnson and 2 more

Open access · goldAbstract read
In one paragraph

Article in Aging cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it, 63 citations in OpenAlex.

  1. Pooled it
  2. Mechanisms of Anti-Aging Effect ofMolecules (Basel, Switzerland) · 2026
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  8. Multi-Omics Integrative Analysis to Reveal the Impacts ofInternational journal of molecular sciences · 2024
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  10. The Emerging Role of 3-Hydroxyanthranilic Acid onbioRxiv : the preprint server for biology · 2024
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  11. Chaperone Activators.Sub-cellular biochemistry · 2024
    Review
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  14. Review
  15. Article
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  17. Review
  18. Review
  19. Article
  20. Plasma Anthranilic Acid and Leptin Levels Predict HAM-D Scores in Depressed Women.International journal of tryptophan research : IJTR · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

George L SutphinThe Jackson Laboratory, 600 Main Street, Bar Harbor, ME, 04609, USA.ORCID 0000-0002-3659-4678
Grant BackerThe Jackson Laboratory, 600 Main Street, Bar Harbor, ME, 04609, USA.
Susan SheehanThe Jackson Laboratory, 600 Main Street, Bar Harbor, ME, 04609, USA.
Shannon BeanThe Jackson Laboratory, 600 Main Street, Bar Harbor, ME, 04609, USA.
Caroline CorbanThe Jackson Laboratory, 600 Main Street, Bar Harbor, ME, 04609, USA.
Teresa LiuThe Jackson Laboratory, 600 Main Street, Bar Harbor, ME, 04609, USA.
Marjolein J PetersDepartment of Internal Medicine, Erasmus Medical Center, Postbus 2040, 3000 CA, Rotterdam, The Netherlands.
Joyce B J van MeursDepartment of Internal Medicine, Erasmus Medical Center, Postbus 2040, 3000 CA, Rotterdam, The Netherlands.
Joanne M MurabitoSection of General Internal Medicine, Boston University School of Medicine, 801 Massachusetts Ave, Crosstown Center, Boston, MA, 02118, USA.
Andrew D JohnsonThe National Heart, Lung, and Blood Institute's Framingham Heart Study, 73 Mt. Wayte Ave, Suite 2, Framingham, MA, 01702-5827, USA.
Ron KorstanjeThe Jackson Laboratory, 600 Main Street, Bar Harbor, ME, 04609, USA.
Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium Gene Expression Working Group
Jackson Laboratory · USErasmus MC · NLBoston University · USNational Heart Lung and Blood Institute · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
Cardiovascular Genomics and Bioinformatics projectsZIAHL006170 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI JOHNSON, ANDREW · 2013 to 2025
$25.3M
Translational CoreP30AG038070 · NIA · JACKSON LABORATORY · PI John Matthew Mahoney · 2010 to 2026
$19.3M
NCI NIH HHS P30 CA034196NIA NIH HHS P30 AG038070
6 · The paper itself

Abstract

We report a systematic RNAi longevity screen of 82 Caenorhabditis elegans genes selected based on orthology to human genes differentially expressed with age. We find substantial enrichment in genes for which knockdown increased lifespan. This enrichment is markedly higher than published genomewide longevity screens in C. elegans and similar to screens that preselected candidates based on longevity-correlated metrics (e.g., stress resistance). Of the 50 genes that affected lifespan, 46 were previously unreported. The five genes with the greatest impact on lifespan (>20% extension) encode the enzyme kynureninase (kynu-1), a neuronal leucine-rich repeat protein (iglr-1), a tetraspanin (tsp-3), a regulator of calcineurin (rcan-1), and a voltage-gated calcium channel subunit (unc-36). Knockdown of each gene extended healthspan without impairing reproduction. kynu-1(RNAi) alone delayed pathology in C. elegans models of Alzheimer's disease and Huntington's disease. Each gene displayed a distinct pattern of interaction with known aging pathways. In the context of published work, kynu-1, tsp-3, and rcan-1 are of particular interest for immediate follow-up. kynu-1 is an understudied member of the kynurenine metabolic pathway with a mechanistically distinct impact on lifespan. Our data suggest that tsp-3 is a novel modulator of hypoxic signaling and rcan-1 is a context-specific calcineurin regulator. Our results validate C. elegans as a comparative tool for prioritizing human candidate aging genes, confirm age-associated gene expression data as valuable source of novel longevity determinants, and prioritize select genes for mechanistic follow-up.

Indexed as

Gene Expression Regulation, DevelopmentalGenomeAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCalcium ChannelsGene OntologyGenome-Wide Association StudyHumansHydrolasesLeucine-Rich Repeat ProteinsLongevityMolecular Sequence AnnotationMuscle ProteinsProteinsRNA, Small InterferingCaenorhabditis elegans ProteinsCalcium ChannelsHydrolaseskynureninaseLeucine-Rich Repeat ProteinsMuscle ProteinsProteinsRNA, Small InterferingTetraspaninsUNC-36 protein, C elegansagingCaenorhabditis eleganscomparative geneticsHomo sapienslifespantranscriptomics

Identifiers

PMID28401650
PMCPMC5506438
OpenAlexW2606347017

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.