ArticlePlant cell reports2017
Genome-wide identification and characterization of NB-ARC resistant genes in wheat (Triticum aestivum L.) and their expression during leaf rust infection.
Article in Plant cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed, 59 citations in OpenAlex.
- Development and characterization of NB-ARC gene-derived SSRs in wheat (Triticum aestivum L.).Molecular biology reports · 2026Article
- A machine learning approach to genome-wide association mapping of disease resistance and geographic origin in sorghum.BMC plant biology · 2026Article
- Integrated genome-wide association study (GWAS) and metabolomics identify genetic and metabolic drivers of stripe rust resistance in wheat from the Western Himalayas.Functional & integrative genomics · 2026Article
- Lipid Metabolism and Actin Cytoskeleton Regulation Underlie Yield and Disease Resistance in TwoPlants (Basel, Switzerland) · 2025Article
- Markers Associated with Starch, Protein and Asparagine Content in Grain of Common Wheat.Genes · 2025Article
- Multi-locus GWAS analysis identifies genomic regions associated with resistance to ergot (Claviceps africana) in sorghum.PloS one · 2025Article
- Candidate Genes and Favorable Haplotypes Associated with Iron Toxicity Tolerance in Rice.International journal of molecular sciences · 2024Article
- QTL mapping of downy mildew resistance in foxtail millet by SLAF‑seq and BSR-seq analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Fine mapping of a major QTL, qKl-1BL controlling kernel length in common wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Article
- Comparative transcriptome profiling of near isogenic lines PBW343 and FLW29 to unravel defense related genes and pathways contributing to stripe rust resistance in wheat.Functional & integrative genomics · 2023Article
- Analysis ofPlants (Basel, Switzerland) · 2022Article
- A pan-genome and chromosome-length reference genome of narrow-leafed lupin (Lupinus angustifolius) reveals genomic diversity and insights into key industry and biological traits.The Plant journal : for cell and molecular biology · 2022Article
- Systematic Analysis of NB-ARC Gene Family in Rice and Functional Characterization ofFrontiers in genetics · 2022Article
- Genome-Wide Association Analysis and Gene Mining of Resistance to China Race 1 of Frogeye Leaf Spot in Soybean.Frontiers in plant science · 2022Article
- Genome-wide association mapping identifies novel loci underlying fire blight resistance in apple.The plant genome · 2021Article
- Comprehensive molecular dissection of TIFY Transcription factors reveal their dynamic responses to biotic and abiotic stress in wheat (Triticum aestivum L.).Scientific reports · 2021Article
- De novo transcriptome in roots of switchgrass (Panicum virgatum L.) reveals gene expression dynamic and act network under alkaline salt stress.BMC genomics · 2021Article
- Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (International journal of genomics · 2021Article
- High-Throughput Sequencing-Based Identification of miRNAs and Their Target mRNAs in Wheat Variety Qing Mai 6 Under Salt Stress Condition.Frontiers in genetics · 2021Article
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageNB-ARC domain-containing resistance genes from the wheat genome were identified, characterized and localized on chromosome arms that displayed differential yet positive response during incompatible and compatible leaf rust interactions. Wheat (Triticum aestivum L.) is an important cereal crop; however, its production is affected severely by numerous diseases including rusts. An efficient, cost-effective and ecologically viable approach to control pathogens is through host resistance. In wheat, high numbers of resistance loci are present but only few have been identified and cloned. A comprehensive analysis of the NB-ARC-containing genes in complete wheat genome was accomplished in this study. Complete NB-ARC encoding genes were mined from the Ensembl Plants database to predict 604 NB-ARC containing sequences using the HMM approach. Genome-wide analysis of orthologous clusters in the NB-ARC-containing sequences of wheat and other members of the Poaceae family revealed maximum homology with Oryza sativa indica and Brachypodium distachyon. The identification of overlap between orthologous clusters enabled the elucidation of the function and evolution of resistance proteins. The distributions of the NB-ARC domain-containing sequences were found to be balanced among the three wheat sub-genomes. Wheat chromosome arms 4AL and 7BL had the most NB-ARC domain-containing contigs. The spatio-temporal expression profiling studies exemplified the positive role of these genes in resistant and susceptible wheat plants during incompatible and compatible interaction in response to the leaf rust pathogen Puccinia triticina. Two NB-ARC domain-containing sequences were modelled in silico, cloned and sequenced to analyze their fine structures. The data obtained in this study will augment isolation, characterization and application NB-ARC resistance genes in marker-assisted selection based breeding programs for improving rust resistance in wheat.
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