Evidence map›Paper›PMID 28398347›Full record

Trial reportThe ISME journal2017

Microbial shifts and signatures of long-term remission in ulcerative colitis after faecal microbiota transplantation.

Susana Fuentes, Noortje G Rossen, Mirjam J van der Spek, Jorn Ha Hartman, Laura Huuskonen, Katri Korpela, Jarkko Salojärvi, Steven Aalvink, Willem M de Vos, Geert R D'Haens and 2 more

Open access · bronzeAbstract readRandomized Controlled Trial
In one paragraph

Trial report in The ISME journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 128 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
128citing papers in PubMed, 5 pooled it
9.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

128 citing papers in PubMed, 5 syntheses or guidelines pooled it, 215 citations in OpenAlex.

  1. Guideline
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Fecal transplantation for treatment of inflammatory bowel disease.The Cochrane database of systematic reviews · 2018
    Pooled it
  6. Trial
  7. Trial
  8. Trial
  9. Trial
  10. Trial
  11. Microorganisms · 2026
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Review
  19. Gut microbes · 2025
    Article
  20. Review

68 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Susana FuentesLaboratory of Microbiology, Wageningen University, Wageningen, The Netherlands.
Noortje G RossenDepartment of Gastroenterology and Hepatology, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
Mirjam J van der SpekDepartment of Gastroenterology and Hepatology, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
Jorn Ha HartmanLaboratory of Microbiology, Wageningen University, Wageningen, The Netherlands.
Laura HuuskonenRPU Immunobiology, Department of Bacteriology and Immunology, University of Helsinki, Helsinki, Finland.
Katri KorpelaRPU Immunobiology, Department of Bacteriology and Immunology, University of Helsinki, Helsinki, Finland.
Jarkko SalojärviDepartment of Biosciences, University of Helsinki, Helsinki, Finland.
Steven AalvinkLaboratory of Microbiology, Wageningen University, Wageningen, The Netherlands.
Willem M de VosLaboratory of Microbiology, Wageningen University, Wageningen, The Netherlands.
Geert R D'HaensDepartment of Gastroenterology and Hepatology, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
Erwin G ZoetendalLaboratory of Microbiology, Wageningen University, Wageningen, The Netherlands.
Cyriel Y PonsioenDepartment of Gastroenterology and Hepatology, Academic Medical Center Amsterdam, Amsterdam, The Netherlands.
Wageningen University & Research · NLAcademic Medical Center · NLUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Faecal microbiota transplantation (FMT) may contribute towards disease remission in ulcerative colitis (UC), but it is unknown which factors determine long-term effect of treatment. Here, we aimed to identify bacterial signatures associated with sustained remission. To this end, samples from healthy donors and UC patients-grouped into responders and non-responders at a primary end point (week 12) and further stratified by sustained clinical remission and relapse assessed at ⩾1-year follow-up were analysed, comparing the efficacy of FMT from either a healthy donor or autologous faeces. Microbiota composition was determined with a 16S rRNA gene-based phylogenetic microarray on faecal and mucosal samples, and functional profiles were predicted using PICRUSt with quantitative PCR verification of the butyrate production capacity; short-chain fatty acids were measured in faecal samples. At baseline, UC patients showed reduced amounts of bacterial groups from the Clostridium cluster XIVa, and significantly higher levels of Bacteroidetes as compared with donors. These differences were reduced after FMT mostly in responders. Sustained remission was associated with known butyrate producers and overall increased butyrate production capacity, while relapse was associated with Proteobacteria and Bacteroidetes. Ruminococcus gnavus was found at high levels in donors of failed FMT. A microbial ecosystem rich in Bacteroidetes and Proteobacteria and low in Clostridium clusters IV and XIVa observed in UC patients after FMT was predictive of poor sustained response, unless modified with a donor microbiota rich in specific members from the Clostridium clusters IV and XIVa. Additionally, sustained response was associated with restoration of the butyrate production capacity.

Indexed as

Fecal Microbiota TransplantationAdultBacteriaChronic DiseaseColitis, UlcerativeFecesFemaleHumansMaleMicrobiotaMiddle AgedPhylogeny

Identifiers

PMID28398347
PMCPMC5520032
OpenAlexW2605872624

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.