Evidence map›Paper›PMID 28396564›Full record

ArticleMolecular pharmacology2017

Structural Analysis of the Glucocorticoid Receptor Ligand-Binding Domain in Complex with Triamcinolone Acetonide and a Fragment of the Atypical Coregulator, Small Heterodimer Partner.

Emily R Weikum, C Denise Okafor, Emma H D'Agostino, Jennifer K Colucci, Eric A Ortlund

Open access · bronzeAbstract read
In one paragraph

Article in Molecular pharmacology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Structural insights into glucocorticoid receptor function.Biochemical Society transactions · 2021
    Review
  9. Glucocorticoid receptor condensates link DNA-dependent receptor dimerization and transcriptional transactivation.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  10. Review
  11. Disruption of a key ligand-H-bond network drives dissociative properties in vamorolone for Duchenne muscular dystrophy treatment.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Emily R WeikumDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia.
C Denise OkaforDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia.
Emma H D'AgostinoDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia.
Jennifer K ColucciDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia.
Eric A OrtlundDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia eortlun@emory.edu.
Emory University · US

Funding

IRACDA Fellowships in Research and Science Training (FIRST)K12GM000680 · NIGMS · EMORY UNIVERSITY · PI BROWN, LOU ANN S, MCCARTY, NAEL A · 2000 to 2024
$41.2M
Training Program in Biochemistry, Cell and Molecular BiologyT32GM008367 · NIGMS · EMORY UNIVERSITY · PI BOISE, LAWRENCE H., CORBETT, ANITA H. · 1990 to 2019
$5.6M
Targeting LRH-1 - Phospholipid Signaling in Metabolic PathwaysR01DK095750 · NIDDK · EMORY UNIVERSITY · PI ORTLUND, ERIC A · 2012 to 2016
$1.7M
A Novel Mechanism for the Glucocorticoid Receptor in Inflammatory Gene RegulationF31GM113397 · NIGMS · EMORY UNIVERSITY · PI WEIKUM, EMILY RYE · 2015 to 2017
$111k
NIDDK NIH HHS R01 DK095750NIGMS NIH HHS F31 GM113397NIGMS NIH HHS K12 GM000680NIGMS NIH HHS T32 GM008367
6 · The paper itself

Abstract

The synthetic glucocorticoids (GCs) dexamethasone, mometasone furoate, and triamcinolone acetonide are pharmaceutical mainstays to treat chronic inflammatory diseases. These drugs bind to the glucocorticoid receptor (GR), a ligand-activated transcription factor and member of the nuclear receptor superfamily. The GR is widely recognized as a therapeutic target for its ability to counter proinflammatory signaling. Despite the popularity of GCs in the clinic, long-term use leads to numerous side effects, driving the need for new and improved drugs with less off-target pharmacology. X-ray crystal structures have played an important role in the drug-design process, permitting the characterization of robust structure-function relationships. However, steroid receptor ligand-binding domains (LBDs) are inherently unstable, and their crystallization requires extensive mutagenesis to enhance expression and crystallization. Here, we use an ancestral variant of GR as a tool to generate a high-resolution crystal structure of GR in complex with the potent glucocorticoid triamcinolone acetonide (TA) and a fragment of the small heterodimer partner (SHP). Using structural analysis, molecular dynamics, and biochemistry, we show that TA increases intramolecular contacts within the LBD to drive affinity and enhance stability of the receptor-ligand complex. These data support the emerging theme that ligand-induced receptor conformational dynamics at the mouth of the pocket play a major role in steroid receptor activation. This work also represents the first GR structure in complex with SHP, which has been suggested to play a role in modulating hepatic GR function.

Indexed as

Amino Acid SequenceBinding SitesCrystallography, X-RayDose-Response Relationship, DrugGlucocorticoidsHumansProtein Structure, SecondaryReceptors, Cytoplasmic and NuclearReceptors, GlucocorticoidTriamcinolone AcetonideGlucocorticoidsnuclear receptor subfamily 0, group B, member 2Receptors, Cytoplasmic and NuclearReceptors, GlucocorticoidTriamcinolone Acetonide

Identifiers

PMID28396564
PMCPMC5452056
OpenAlexW2606812026

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.