Evidence map›Paper›PMID 28396347›Full record

ArticleThe Journal of biological chemistry2017

Serotype-specific interactions among functional domains of dengue virus 2 nonstructural proteins (NS) 5 and NS3 are crucial for viral RNA replication.

Tadahisa Teramoto, Anuradha Balasubramanian, Kyung H Choi, Radhakrishnan Padmanabhan

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Infections ofViruses · 2025
    Article
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  3. Review
  4. Article
  5. Article
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  7. Review
  8. Article
  9. Article
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  11. Article
  12. Viruses · 2019
    Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Tadahisa TeramotoFrom the Department of Microbiology and Immunology, School of Medicine, Georgetown University, Washington, D. C. 20057 and.
Anuradha BalasubramanianFrom the Department of Microbiology and Immunology, School of Medicine, Georgetown University, Washington, D. C. 20057 and.
Kyung H Choithe Department of Biochemistry and Molecular Biology, University of Texas Medical Branch, Galveston, Texas 77555-0156.
Radhakrishnan PadmanabhanFrom the Department of Microbiology and Immunology, School of Medicine, Georgetown University, Washington, D. C. 20057 and rp55@georgetown.edu.
Georgetown University · USThe University of Texas Medical Branch at Galveston · US

Funding

MECHANISM OF RNA SYNTHESIS BY DENGUE VIRUS NS5R01AI087856 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI Kyung H Choi · 2011 to 2026
$5.5M
NIAID NIH HHS R01 AI087856
6 · The paper itself

Abstract

Four serotypes of mosquito-borne dengue virus (DENV), evolved from a common ancestor, are human pathogens of global significance for which there is no vaccine or antiviral drug available. The N-terminal domain of DENV NS5 has guanylyltransferase and methyltransferase (MTase), and the C-terminal region has the polymerase (POL), all of which are important for 5'-capping and RNA replication. The crystal structure of NS5 shows it as a dimer, but the functional evidence for NS5 dimer is lacking. Our studies showed that the substitution of DENV2 NS5 MTase or POL for DENV4 NS5 within DENV2 RNA resulted in a severe attenuation of replication in the transfected BHK-21 cells. A replication-competent species was evolved with the acquired mutations in the DENV2 and DENV4 NS5 MTase or POL domain or in the DENV2 NS3 helicase domain in the DENV2 chimera RNAs by repeated passaging of infected BHK-21 or mosquito cells. The linker region of seven residues in NS5, rich in serotype-specific residues, is important for the recovery of replication fitness in the chimera RNA. Our results, taken together, provide genetic evidence for a serotype-specific interaction between NS3 and NS5 as well as specific interdomain interaction within NS5 required for RNA replication. Genome-wide RNAseq analysis revealed the distribution of adaptive mutations in RNA quasispecies. Those within NS3 and NS5 are located at the surface and/or within the NS5 dimer interface, providing a functional significance to the crystal structure NS5 dimer.

Indexed as

RNA, ViralSerogroupViral Nonstructural ProteinsAnimalsCell LineCricetinaeCulicidaeDEAD-box RNA HelicasesDengue VirusHumansNucleoside-TriphosphataseProtein DomainsRNA HelicasesSerine EndopeptidasesViral ProteasesVirus ReplicationDEAD-box RNA HelicasesNS3 protein, flavivirusNS5 protein, dengue virusNucleoside-TriphosphataseRNA HelicasesRNA, ViralSerine EndopeptidasesViral Nonstructural ProteinsViral Proteasesdengue virus (DENV)protein-protein interactionRNA helicaseRNA methyltransferaseRNA polymeraseRNA-protein interactionRNA virusviral polymeraseviral replication

Identifiers

PMID28396347
PMCPMC5465476
OpenAlexW2606931889

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.